RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 HIVEP2P31629 2446 aa11.16□□□□□ -0.62
CLTCL1-212ENST00000622493 S100A9P06702 114 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-212ENST00000622493 SMIM6P0DI80 62 aa11.15□□□□□ -0.62
CLTCL1-212ENST00000622493 CAMLGP49069 296 aa11.15□□□□□ -0.62
CLTCL1-212ENST00000622493 RNF212Q495C1 297 aa11.15□□□□□ -0.62
CLTCL1-212ENST00000622493 ZNF418Q8TF45 676 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-212ENST00000622493 ACY3Q96HD9 319 aa11.15□□□□□ -0.62
CLTCL1-212ENST00000622493 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 H3BUA1 57 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 K7EIM0 57 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 AGPAT2O15120 278 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 MBP02144 154 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 PRH1P02810 166 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 PPIFP30405 207 aaKnown RBP11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 SRSF3P84103 164 aaKnown RBP11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 DPPA3Q6W0C5 159 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 Q6ZS46 218 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 OR4X1Q8NH49 305 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 NPIPB3Q92617 1050 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 MGST2Q99735 147 aa11.15□□□□□ -0.63
CLTCL1-212ENST00000622493 IGKV1OR2-108A0A075B7D4 117 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 RPL29P47914 159 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 RND2P52198 227 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 RPL15P61313 204 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 AKR1C8PQ5T2L2 129 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 TMEM182Q6ZP80 229 aaPredicted RBP11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 Q8N2B8 174 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 THAP8Q8NA92 274 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 NECAP1Q8NC96 275 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 VN1R17PQ8TDU5 208 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 TCEAL7Q9BRU2 100 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 GGTLC1Q9BX51 225 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 ZNF355PQ9NSJ1 428 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
CLTCL1-212ENST00000622493 COLCA2A8K830 154 aa11.13□□□□□ -0.63
CLTCL1-212ENST00000622493 ACSM6Q6P461 480 aa11.13□□□□□ -0.63
CLTCL1-212ENST00000622493 FBXL7Q9UJT9 491 aa11.13□□□□□ -0.63
CLTCL1-212ENST00000622493 RFNGQ9Y644 331 aa11.13□□□□□ -0.63
CLTCL1-212ENST00000622493 ZFP92A6NM28 416 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 EIF3GO75821 320 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 OR2J3O76001 311 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 TSPAN15O95858 294 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 CD5P06127 495 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 FCGR2BP31994 310 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 NOL4LQ96MY1 436 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 DUX5Q96PT3 197 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 JMJD8Q96S16 334 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 TXN2Q99757 166 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 ZNF702PQ9H963 129 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 LINC00527Q9UJ94 153 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 TRAV30A0A087WSZ9 112 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 TCRBV4S1A1TA0A5B7 111 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 UBE2CO00762 179 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 CLN5O75503 358 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 S100A6P06703 90 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 OR10J1P30954 320 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 MFAP4P55083 255 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 HILS1P60008 231 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 SELENOTP62341 195 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 RHOGP84095 191 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 CFHR3Q02985 330 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 COMMD1Q8N668 190 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 C2CD4CQ8TF44 421 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 TRGV9Q99603 122 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 HRH4Q9H3N8 390 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 TMEM231Q9H6L2 316 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 TUBA4BQ9H853 241 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 ESM1Q9NQ30 184 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 PXMP4Q9Y6I8 212 aa11.12□□□□□ -0.63
CLTCL1-212ENST00000622493 IGHV3-21A0A0B4J1V1 117 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 C5orf52A6NGY3 159 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 SCGB2A1O75556 95 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 NDUFB8O95169 186 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 IGLV1-40P01703 118 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 SFTA3P0C7M3 94 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 PRR20EP86478 221 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 PRR20CP86479 221 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 PRR20DP86480 221 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 PRR20BP86481 221 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 PRR20AP86496 221 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 C15orf32Q32M92 178 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 ACOT6Q3I5F7 207 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 TMEM41BQ5BJD5 291 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 FFAR4Q5NUL3 377 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 CYP2G1PQ6ZSU1 146 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 GSX1Q9H4S2 264 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 GAR1Q9NY12 217 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-212ENST00000622493 IGKV1D-37A0A075B6S9 117 aa11.1□□□□□ -0.63
CLTCL1-212ENST00000622493 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms