RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ATP6V0BQ99437 205 aa13.48□□□□□ -0.25
SCAMP4-213ENST00000621748 MRPL27Q9P0M9 148 aaKnown RBP13.48□□□□□ -0.25
SCAMP4-213ENST00000621748 UFC1Q9Y3C8 167 aa13.48□□□□□ -0.25
SCAMP4-213ENST00000621748 OR11H12B2RN74 326 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 INS-IGF2F8WCM5 200 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 C3orf84H3BNL1 204 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 I3L2K1 104 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 SCAF4O95104 1147 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 IAPPP10997 89 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 BCAP31P51572 246 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 ID3Q02535 119 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 UBAC2Q8NBM4 344 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 SLC24A4Q8NFF2 622 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 MUC7Q8TAX7 377 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 MISP3Q96FF7 219 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 CITED4Q96RK1 184 aa13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 DYNC2H1Q8NCM8 4307 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-213ENST00000621748 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 IFNA4P05014 189 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 CTSGP08311 255 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 NPY1RP25929 384 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 FCN2Q15485 313 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 Q56UQ5 140 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 ZNF114Q8NC26 417 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 ZNF414Q96IQ9 312 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 SPATA25Q9BR10 227 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 PSENENQ9NZ42 101 aa13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 STRAPQ9Y3F4 350 aaKnown RBP13.46□□□□□ -0.25
SCAMP4-213ENST00000621748 IGHV3OR16-8A0A075B7F1 116 aa13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 RPS10-NUDT3A0A1W2PQS6 291 aa13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 NDUFA4O00483 81 aa13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 IGHV3-48P01763 117 aa13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 MBPP02686 304 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 FGL1Q08830 312 aa13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 LRRC37A5PQ49AS3 106 aa13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 SPANXN5Q5MJ07 72 aa13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 SRD5A3Q9H8P0 318 aa13.45□□□□□ -0.26
SCAMP4-213ENST00000621748 TRAV25A0A0B4J276 109 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 SCGB2A1O75556 95 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 MT-CO2P00403 227 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 TAS2R30P59541 319 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 ETFRF1Q6IPR1 90 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 Q6ZNX1 250 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 SLC16A13Q7RTY0 426 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 THAP6Q8TBB0 222 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 PINX1Q96BK5 328 aaKnown RBP13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 SMIM8Q96KF7 97 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 C20orf24Q9BUV8 137 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 EDA2RQ9HAV5 297 aa13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 DAZ1Q9NQZ3 744 aaKnown RBP13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 RCL1Q9Y2P8 373 aaKnown RBP13.44□□□□□ -0.26
SCAMP4-213ENST00000621748 K7EPK0 472 aa13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 ZNF207O43670 478 aaKnown RBP13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 FCGR2BP31994 310 aaPredicted RBP13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 NUP62P37198 522 aaPredicted RBP13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 MFAP4P55083 255 aa13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 C2orf83Q53S99 150 aa13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 CASC10Q5T4H9 136 aa13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 RBPMS2Q6ZRY4 209 aaKnown RBP13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 RNASEH2CQ8TDP1 164 aaKnown RBP13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 RETNQ9HD89 108 aa13.43□□□□□ -0.26
SCAMP4-213ENST00000621748 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 CSMD3Q7Z407 3707 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 hCG_2014768A0A024R1R8 64 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 E5RGE8 158 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 K7EMT4 169 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 NUPL2O15504 423 aaKnown RBP13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 GIPP09681 153 aaPredicted RBP13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 RNASE2P10153 161 aaKnown RBP13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 OPRK1P41145 380 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 CAV2P51636 162 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 H2BFSP57053 126 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 RAP2BP61225 183 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 RAB32Q13637 225 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 OR11H7Q8NGC8 314 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 PPP1R1CQ8WVI7 109 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 TXN2Q99757 166 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 GAR1Q9NY12 217 aaKnown RBP13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 SACSQ9NZJ4 4579 aa13.42□□□□□ -0.26
SCAMP4-213ENST00000621748 H3BP45 60 aa13.41□□□□□ -0.26
SCAMP4-213ENST00000621748 TSC22D2O75157 780 aa13.41□□□□□ -0.26
SCAMP4-213ENST00000621748 CXCL3P19876 107 aa13.41□□□□□ -0.26
SCAMP4-213ENST00000621748 C15orf62A8K5M9 175 aa13.4□□□□□ -0.26
SCAMP4-213ENST00000621748 LYL1P12980 280 aa13.4□□□□□ -0.26
SCAMP4-213ENST00000621748 RELQ04864 619 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-213ENST00000621748 PVRIGQ6DKI7 326 aa13.4□□□□□ -0.26
SCAMP4-213ENST00000621748 STX12Q86Y82 276 aa13.4□□□□□ -0.26
SCAMP4-213ENST00000621748 SLC25A31Q9H0C2 315 aa13.4□□□□□ -0.26
SCAMP4-213ENST00000621748 TSPAN4O14817 238 aa13.39□□□□□ -0.27
SCAMP4-213ENST00000621748 GNG7O60262 68 aa13.39□□□□□ -0.27
SCAMP4-213ENST00000621748 DEDDO75618 318 aa13.39□□□□□ -0.27
SCAMP4-213ENST00000621748 YIF1AO95070 293 aa13.39□□□□□ -0.27
SCAMP4-213ENST00000621748 NPBWR1P48145 328 aa13.39□□□□□ -0.27
SCAMP4-213ENST00000621748 SLC35E1Q96K37 410 aa13.39□□□□□ -0.27
SCAMP4-213ENST00000621748 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-213ENST00000621748 FAM110AQ9BQ89 295 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms