RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 NAV3Q8IVL0 2385 aa11.65□□□□□ -0.54
SYN2-205ENST00000620175 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.55
SYN2-205ENST00000620175 IGHV2-70DA0A0C4DH43 119 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 FAM169BQ8N8A8 192 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 ADAMTS9Q9P2N4 1935 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 ORM1P02763 201 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 DUTP33316 252 aaKnown RBP11.64□□□□□ -0.55
SYN2-205ENST00000620175 EML6Q6ZMW3 1958 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 A0A0G2JLM5 398 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 GFRA3O60609 400 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 CCL8P80075 99 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 MBNL2Q5VZF2 373 aaKnown RBP11.64□□□□□ -0.55
SYN2-205ENST00000620175 FER1L6-AS1Q8NA97 138 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 CCL17Q92583 94 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 PRNDQ9UKY0 176 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 OBSL1O75147 1896 aa11.64□□□□□ -0.55
SYN2-205ENST00000620175 SLC25A17O43808 307 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 CEP295Q9C0D2 2601 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 FRYQ5TBA9 3013 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 NBEAP1P0C6P0 100 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 CKS2P33552 79 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 TTTY12Q9BZ98 90 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 RAB9BQ9NP90 201 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 CALYQ9NYX4 217 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 TECTAO75443 2155 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 IGHV2-26A0A0B4J1V2 119 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 GGTLC3B5MD39 225 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 LRRC10Q5BKY1 277 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 DEFB124Q8NES8 71 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
SYN2-205ENST00000620175 IGLC7A0M8Q6 106 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 IGLV3-1P01715 115 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 CD40P25942 277 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 RIGQ13278 110 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 DEFB104AQ8WTQ1 72 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 PPIAL4EA0A075B759 164 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 CGB1A6NKQ9 187 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 PPIAL4FP0DN26 164 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 IL11RAQ14626 422 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 SFXN3Q9BWM7 321 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 TMEM160Q9NX00 188 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 LOC105371242A0A075B767 164 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 H7C2G1 150 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 RNPS1Q15287 305 aaKnown RBP11.62□□□□□ -0.55
SYN2-205ENST00000620175 TIMM23BQ5SRD1 257 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 GGNQ86UU5 652 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 CIARTQ8N365 385 aaPredicted RBP11.62□□□□□ -0.55
SYN2-205ENST00000620175 CT55Q8WUE5 264 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 ST20Q9HBF5 79 aa11.62□□□□□ -0.55
SYN2-205ENST00000620175 RALYQ9UKM9 306 aaKnown RBP11.62□□□□□ -0.55
SYN2-205ENST00000620175 A0A1B0GV72 72 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 DNPH1O43598 174 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 HIST1H1AQ02539 215 aaPredicted RBP11.61□□□□□ -0.55
SYN2-205ENST00000620175 KIR3DS1Q14943 382 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 TWIST1Q15672 202 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 Q6P435 159 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 SCGB1D4Q6XE38 83 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 TMEM105Q8N8V8 129 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 SARAFQ96BY9 339 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 ZNF414Q96IQ9 312 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 TWSG1Q9GZX9 223 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 CSTL1Q9H114 145 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 TRAV9-1A0A075B6T8 112 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 A0A1B0GWB2 263 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 AHRRA9YTQ3 701 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 K7EP13 123 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 CLDN18P56856 261 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 MEF2CQ06413 473 aaPredicted RBP11.61□□□□□ -0.55
SYN2-205ENST00000620175 OR1L8Q8NGR8 309 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 ZNF418Q8TF45 676 aaPredicted RBP11.61□□□□□ -0.55
SYN2-205ENST00000620175 CACNA1AO00555 2505 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 PMS2CLQ68D20 193 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 MZT1Q08AG7 82 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 INO80CQ6PI98 192 aaPredicted RBP11.61□□□□□ -0.55
SYN2-205ENST00000620175 DNASE2BQ8WZ79 361 aa11.61□□□□□ -0.55
SYN2-205ENST00000620175 SMIM13P0DJ93 91 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 AREGP15514 252 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 COX7A1P24310 79 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 SPAARA0A1B0GVQ0 90 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 PPIAL4GP0DN37 164 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
SYN2-205ENST00000620175 ATP1A1-AS1Q5TC04 95 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 ACP7Q6ZNF0 438 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 COQ2Q96H96 371 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 HIST1H4GQ99525 98 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 RPP21Q9H633 154 aaKnown RBP11.6□□□□□ -0.55
SYN2-205ENST00000620175 ZCCHC24Q8N2G6 241 aaKnown RBP11.6□□□□□ -0.55
SYN2-205ENST00000620175 SIGMAR1Q99720 223 aa11.6□□□□□ -0.55
SYN2-205ENST00000620175 SPTBN4Q9H254 2564 aa11.59□□□□□ -0.55
SYN2-205ENST00000620175 C9JCJ5 164 aa11.59□□□□□ -0.55
SYN2-205ENST00000620175 PAX2Q02962 417 aa11.59□□□□□ -0.55
SYN2-205ENST00000620175 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
SYN2-205ENST00000620175 ITLN1Q8WWA0 313 aa11.59□□□□□ -0.55
SYN2-205ENST00000620175 IMMP1LQ96LU5 166 aa11.59□□□□□ -0.55
SYN2-205ENST00000620175 MGST3O14880 152 aa11.59□□□□□ -0.55
SYN2-205ENST00000620175 SCGB2A1O75556 95 aa11.59□□□□□ -0.55
SYN2-205ENST00000620175 PPIFP30405 207 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms