RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 OR52E5Q8NH55 327 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 ST6GALNAC6Q969X2 333 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 PRNDQ9UKY0 176 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 J3QR06 171 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 CA2P00918 260 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 GLRXP35754 106 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 CX3CL1P78423 397 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 AARDQ4LEZ3 155 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 C22orf15Q8WYQ4 148 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 ADTRPQ96IZ2 230 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 DCTN5Q9BTE1 182 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 MGST3O14880 152 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 TFF1P04155 84 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 MRPS11P82912 194 aaKnown RBP5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 LINC01560Q8TB33 94 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 COQ2Q96H96 371 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 COMMD5Q9GZQ3 224 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 OR51B2Q9Y5P1 312 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 C3orf79P0CE67 100 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 PRRX1P54821 245 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 ERHP84090 104 aaKnown RBP5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 CD300EQ496F6 205 aaPredicted RBP5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 SLC25A10Q9UBX3 287 aaPredicted RBP5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 F2Z2F3 143 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 H0Y8G0 127 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 FOXH1O75593 365 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 TOX4O94842 621 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 LINC00869P0C866 280 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 C8orf88P0DMB2 117 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 ESDP10768 282 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 BSPH1Q075Z2 132 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 C19orf24Q9BVV8 132 aa5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 SSBP3Q9BWW4 388 aaPredicted RBP5.72□□□□□ -1.49
SRGAP3-213ENST00000618999 A0A1W2PS18 150 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 IZUMO1RA6ND01 250 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 K7EN84 100 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 HYPMO75409 117 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 P0C879 139 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 HIST1H1EP10412 219 aaKnown RBP5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 AREGP15514 252 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 ORAOV1Q8WV07 137 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 C11orf52Q96A22 123 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 V9GYV3 84 aa5.71□□□□□ -1.49
SRGAP3-213ENST00000618999 C15orf61A6NNL5 157 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 ISLRO14498 428 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 APOA2P02652 100 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 IGLC2P0DOY2 106 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 IGLC3P0DOY3 106 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 FAM90A1Q86YD7 464 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 OR2D3Q8NGH3 330 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 SPXQ9BT56 116 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 NCOR1P1Q9H4R4 102 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 PPIAL4AQ9Y536 164 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 LOC102724200A0A096LPH7 203 aaPredicted RBP5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 CHEK1O14757 476 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 MORN2Q502X0 79 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 WDR82Q6UXN9 313 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 GAL3ST2Q9H3Q3 398 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 ZNF355PQ9NSJ1 428 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 USF3Q68DE3 2245 aa5.71□□□□□ -1.5
SRGAP3-213ENST00000618999 TRAV9-2A0A087WT02 112 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 TRAV3A0A0B4J244 114 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 MMP23AO75900 390 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 VDAC2P45880 294 aaPredicted RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 SUB1P53999 127 aaKnown RBP eCLIP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 OR4A47Q6IF82 309 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 Q6ZR03 302 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 TMEM136Q6ZRR5 245 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 C1orf229Q6ZS94 237 aaPredicted RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 OR1L4Q8NGR5 311 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 ZNF596Q8TC21 504 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 C5orf30Q96GV9 206 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 CITED1Q99966 193 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 TMEM191AQ9H0A3 160 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 CALYQ9NYX4 217 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 WASHC3Q9Y3C0 194 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 AMMECR1Q9Y4X0 333 aaPredicted RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 ANKHD1Q8IWZ3 2542 aaKnown RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 IGHV3OR15-7A0A075B7D8 119 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 A0A087WWL8 130 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 YPEL1O60688 119 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 TSPOP30536 169 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 MSMPQ1L6U9 139 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 UNQ5815/PRO19632Q6UWF5 114 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 LEAP2Q969E1 77 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 YPEL2Q96QA6 119 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 ALKBH7Q9BT30 221 aaPredicted RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 DYNLRB1Q9NP97 96 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 ZFYVE26Q68DK2 2539 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 A0A1W2PRE2 83 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 CA1P00915 261 aaPredicted RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 SLC25A5P05141 298 aaKnown RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 HOXA4Q00056 320 aaPredicted RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 LCN12Q6JVE5 192 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 STPG4Q8N801 248 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 DEFB108BQ8NET1 73 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 TSKUQ8WUA8 353 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 RNASE6Q93091 150 aaKnown RBP5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 PAXXQ9BUH6 204 aa5.7□□□□□ -1.5
SRGAP3-213ENST00000618999 JKAMPQ9P055 326 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms