RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TRAV6A0A075B6T7 132 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 TRAV14DV4A0A0A6YYC5 116 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 FAM240BA0A1B0GVZ2 78 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 PMS2P5A8MQ11 134 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 CHEK1O14757 476 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 H2AFB2P0C5Z0 115 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 FRMD6-AS1P0C7T7 363 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 IGHV4-30-4P0DP06 118 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 PAX9P55771 341 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 IL15RAQ13261 267 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 MZT2BQ6NZ67 158 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 BTNL8Q6UX41 500 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 OR1S2Q8NGQ3 325 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 DYNLRB2Q8TF09 96 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 CIB3Q96Q77 187 aaPredicted RBP6.18□□□□□ -1.42
NEK3-209ENST00000618856 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
NEK3-209ENST00000618856 FAM110AQ9BQ89 295 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 PUS1Q9Y606 427 aaKnown RBP eCLIP6.18□□□□□ -1.42
NEK3-209ENST00000618856 U3KQE9 123 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
NEK3-209ENST00000618856 NBEAL2Q6ZNJ1 2754 aa6.18□□□□□ -1.42
NEK3-209ENST00000618856 IFNA10P01566 189 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 IFNA21P01568 189 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 APOHP02749 345 aaPredicted RBP6.17□□□□□ -1.42
NEK3-209ENST00000618856 CD7P09564 240 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 CRYBB3P26998 211 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 RND2P52198 227 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 TAS2R30P59541 319 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 POLR2GP62487 172 aaKnown RBP eCLIP6.17□□□□□ -1.42
NEK3-209ENST00000618856 GAMTQ14353 236 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 TIGITQ495A1 244 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 TMEM14EPQ6UXP3 125 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 SLC16A13Q7RTY0 426 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 NRARPQ7Z6K4 114 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 SBSPONQ8IVN8 264 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 LILRB2Q8N423 598 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 THAP8Q8NA92 274 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 ZBTB8BQ8NAP8 495 aaPredicted RBP6.17□□□□□ -1.42
NEK3-209ENST00000618856 SMIM8Q96KF7 97 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 RNF2Q99496 336 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 NEURL2Q9BR09 285 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 SEC22CQ9BRL7 303 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 MARVELD1Q9BSK0 173 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 RHPN1-AS1Q9BWJ2 59 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 MAGT1Q9H0U3 335 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 C11orf1Q9H5F2 150 aa6.17□□□□□ -1.42
NEK3-209ENST00000618856 CSMD3Q7Z407 3707 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 IGKV1OR2-108A0A075B7D4 117 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 IGHV3OR16-8A0A075B7F1 116 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 SNRPGP15A8MWD9 76 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 ZNF207O43670 478 aaKnown RBP6.16□□□□□ -1.42
NEK3-209ENST00000618856 TOMM40O96008 361 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 CD5P06127 495 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 IAPPP10997 89 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 OR10J1P30954 320 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 NKX2-1P43699 371 aaPredicted RBP6.16□□□□□ -1.42
NEK3-209ENST00000618856 CD81P60033 236 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 RAB11AP62491 216 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 RPP30P78346 268 aaKnown RBP6.16□□□□□ -1.42
NEK3-209ENST00000618856 IAH1Q2TAA2 248 aaPredicted RBP6.16□□□□□ -1.42
NEK3-209ENST00000618856 GTSCR1Q86UQ5 136 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 C12orf45Q8N5I9 185 aaPredicted RBP6.16□□□□□ -1.42
NEK3-209ENST00000618856 NPIPB3Q92617 1050 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 TM2D3Q9BRN9 247 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 GINS3Q9BRX5 216 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 C20orf24Q9BUV8 137 aa6.16□□□□□ -1.42
NEK3-209ENST00000618856 RCL1Q9Y2P8 373 aaKnown RBP6.16□□□□□ -1.42
NEK3-209ENST00000618856 TRAV2A0A0B4J234 112 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 FNDC10F2Z333 226 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 WRBO00258 174 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 PRAF2O60831 178 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 TSC22D2O75157 780 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 SCGB2A1O75556 95 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 YIF1AO95070 293 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 MBPP02686 304 aaPredicted RBP6.15□□□□□ -1.42
NEK3-209ENST00000618856 IFNA4P05014 189 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 USF2Q15853 346 aaPredicted RBP6.15□□□□□ -1.42
NEK3-209ENST00000618856 ODF3L2Q3SX64 289 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 LAMTOR1Q6IAA8 161 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 RBPMS2Q6ZRY4 209 aaKnown RBP6.15□□□□□ -1.42
NEK3-209ENST00000618856 Q8WTZ3 238 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 ST8SIA2Q92186 375 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 RAB40CQ96S21 281 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 TRGV9Q99603 122 aa6.15□□□□□ -1.42
NEK3-209ENST00000618856 STARD9Q9P2P6 4700 aa6.15□□□□□ -1.43
NEK3-209ENST00000618856 C7orf66A4D0T2 115 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 RBMY1BA6NDE4 496 aaKnown RBP6.14□□□□□ -1.43
NEK3-209ENST00000618856 RBMY1EA6NEQ0 496 aaKnown RBP6.14□□□□□ -1.43
NEK3-209ENST00000618856 OR11H12B2RN74 326 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 RBMY1DP0C7P1 496 aaKnown RBP6.14□□□□□ -1.43
NEK3-209ENST00000618856 RD3LP0DJH9 198 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 PSG1P11464 419 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 NPPCP23582 126 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 GUCA2BQ16661 112 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 HAGHQ16775 308 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 SPANXN5Q5MJ07 72 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 DEFB125Q8N687 156 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 ENKURQ8TC29 256 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 ACY3Q96HD9 319 aa6.14□□□□□ -1.43
NEK3-209ENST00000618856 C2orf50Q96LR7 162 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms