RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 TTC23Q5W5X9 447 aa4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 EBLN2Q6P2I7 272 aa4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 THAP8Q8NA92 274 aa4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 COQ8AQ8NI60 647 aa4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 NARS2Q96I59 477 aaKnown RBP4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 CMSS1Q9BQ75 279 aaKnown RBP4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 GINS4Q9BRT9 223 aa4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 TMEM59Q9BXS4 323 aa4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 BABAM2Q9NXR7 383 aa4.32□□□□□ -1.72
SCAMP1-206ENST00000618166 A0A0D9SG52 128 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 FOXI3A8MTJ6 420 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 GNGT2O14610 69 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 RLN2P04090 185 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 HNRNPCP07910 306 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 GYPEP15421 78 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 TMEM50BP56557 158 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 TAS2R60P59551 318 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 GNGT1P63211 74 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 IBA57Q5T440 356 aaKnown RBP4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 HSD17B13Q7Z5P4 300 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 ACBD7Q8N6N7 88 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 OR1L8Q8NGR8 309 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 TMEM263Q8WUH6 116 aaKnown RBP4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 IL22RA2Q969J5 263 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 TMEM230Q96A57 120 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 ARHGAP5-AS1Q96IT6 56 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 SLC25A39Q9BZJ4 359 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 MRGBPQ9NV56 204 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 DOK5Q9P104 306 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 KIF25-AS1Q9Y6Z4 181 aa4.31□□□□□ -1.72
SCAMP1-206ENST00000618166 TRBV5-5A0A0J9YX44 114 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 C9JCJ5 164 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 PRAF2O60831 178 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 ZNF324O75467 553 aaPredicted RBP4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 FCGR3AP08637 254 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 CD36P16671 472 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 NFYAP23511 347 aaPredicted RBP4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 DCKP27707 260 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 POLR2IP36954 125 aaKnown RBP4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 NPBWR1P48145 328 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 CNN1P51911 297 aaKnown RBP4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 TIGITQ495A1 244 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 THOC7Q6I9Y2 204 aaKnown RBP4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 NEGR1Q7Z3B1 354 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 SPAG16Q8N0X2 631 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 SYS1Q8N2H4 156 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 PECRQ9BY49 303 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 LPAR5Q9H1C0 372 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 KLK11Q9UBX7 282 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 OR51B2Q9Y5P1 312 aa4.3□□□□□ -1.72
SCAMP1-206ENST00000618166 TMEM235A6NFC5 223 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 TMEM14DPA8MWL7 114 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 PHOX2AO14813 284 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 BUB3O43684 328 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 FAM107AO95990 144 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 IGKV1-17P01599 117 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 IGHV3-53P01767 116 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 IGHV3-30P01768 117 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 IGHV3-33P01772 117 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 IGHV3-30-3P0DP02 117 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 IGHV3-30-5P0DP03 117 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 RAP2AP10114 183 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 VAMP1P23763 118 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 TNFSF8P32971 234 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 PSMB3P49720 205 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 B2MP61769 119 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 RPS11P62280 158 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 QRFPP83859 136 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 PRCDQ00LT1 54 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 TMED1Q13445 227 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 PLAC9Q5JTB6 97 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 MORN5Q5VZ52 161 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 SPATA31B1PQ5VZV4 182 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 DMBX1Q8NFW5 382 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 HSD17B10Q99714 261 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 FGFR1OP2Q9NVK5 253 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 CKLFQ9UBR5 152 aa4.29□□□□□ -1.72
SCAMP1-206ENST00000618166 IGHV3-38A0A0C4DH36 116 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 ERICH4A6NGS2 130 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 SULT1C2O00338 296 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 HLA-DQB1P01920 261 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 NQO2P16083 231 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 CALRP27797 417 aaKnown RBP4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 LINC01547P58512 204 aaPredicted RBP4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 TAS2R31P59538 309 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 MS4A2Q01362 244 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 DHODHQ02127 395 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 POU2AF1Q16633 256 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 ZNF493Q6ZR52 646 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 CROCCP2Q86T23 111 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 RFKQ969G6 155 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 NRBF2Q96F24 287 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 PGLYRP3Q96LB9 341 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 VAX2Q9UIW0 290 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 KCNK7Q9Y2U2 307 aa4.28□□□□□ -1.72
SCAMP1-206ENST00000618166 TRGV2A0A075B6R0 118 aa4.27□□□□□ -1.73
SCAMP1-206ENST00000618166 RNF222A6NCQ9 220 aa4.27□□□□□ -1.73
SCAMP1-206ENST00000618166 K7EQD1 137 aa4.27□□□□□ -1.73
SCAMP1-206ENST00000618166 LALBAP00709 142 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms