RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MMDQ15546 238 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 PPP1R27Q86WC6 154 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 Q8N9W7 124 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 TMED6Q8WW62 240 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 LINC00476Q8WZB0 136 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 DLX4Q92988 240 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 SAT2Q96F10 170 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 UBE2E2Q96LR5 201 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 SRSF8Q9BRL6 282 aaKnown RBP13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 ARV1Q9H2C2 271 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 KLK15Q9H2R5 256 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 KCNIP2Q9NS61 270 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 KIAA1109Q2LD37 5005 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 TEX46H3BTG2 121 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 RRHO14718 337 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 CYB5BO43169 146 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 MPDU1O75352 247 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 PRH1P02810 166 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 S100A1P23297 94 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 RPL27AP46776 148 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 RAB2AP61019 212 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 RUNX1Q01196 453 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 KIAA0141Q14154 515 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 TNXAQ16473 311 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 HAGHQ16775 308 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 SPINK9Q5DT21 86 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 HSD17B11Q8NBQ5 300 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 HSPB9Q9BQS6 159 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 FBXO7Q9Y3I1 522 aa13.48□□□□□ -0.25
TRAPPC3-209ENST00000616395 LINC00862A6NCI5 91 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 CNIH1O95406 144 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 IGLV2-23P01705 113 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 RAB31Q13636 194 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 PRSS8Q16651 343 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 AKR1C8PQ5T2L2 129 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 ZNF491Q8N8L2 437 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 OR4C12Q96R67 309 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 NDUFA4L2Q9NRX3 87 aa13.47□□□□□ -0.25
TRAPPC3-209ENST00000616395 ZNF705EA8MWA4 302 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 FNDC10F2Z333 226 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 SPP1P10451 314 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 SULT1A2P50226 295 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 SLURP1P55000 103 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 DLK1P80370 383 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 ACSM6Q6P461 480 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 DPPA3Q6W0C5 159 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 NPBQ8NG41 125 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 OR2G3Q8NGZ4 309 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 ARPC1AQ92747 370 aa13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 PSMG3Q9BT73 122 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC3-209ENST00000616395 C15orf62A8K5M9 175 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 CORTO00230 105 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 LY6G6CO95867 125 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 MBP02144 154 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 SERF2P84101 59 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 C2orf83Q53S99 150 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 HAPLN4Q86UW8 402 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 OR1L6Q8NGR2 347 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 RASL11BQ9BPW5 248 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 WFDC1Q9HC57 220 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 RETNQ9HD89 108 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 MED9Q9NWA0 146 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 TIMM9Q9Y5J7 89 aa13.45□□□□□ -0.26
TRAPPC3-209ENST00000616395 SMCO3A2RU48 225 aa13.44□□□□□ -0.26
TRAPPC3-209ENST00000616395 ATP6V1G1O75348 118 aa13.44□□□□□ -0.26
TRAPPC3-209ENST00000616395 ATP6V0CP27449 155 aa13.44□□□□□ -0.26
TRAPPC3-209ENST00000616395 CAMLGP49069 296 aa13.44□□□□□ -0.26
TRAPPC3-209ENST00000616395 ETFRF1Q6IPR1 90 aa13.44□□□□□ -0.26
TRAPPC3-209ENST00000616395 NPVFQ9HCQ7 196 aa13.44□□□□□ -0.26
TRAPPC3-209ENST00000616395 UBE2L5PA0A1B0GUS4 154 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 RPS10-NUDT3A0A1W2PQS6 291 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 NDUFA3O95167 84 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 CA2P00918 260 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 IGF1P05019 195 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 CRYGBP07316 175 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 NMBP08949 121 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 FAM74A1Q5RGS3 127 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 RNASEH2CQ8TDP1 164 aaKnown RBP13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 BSCL2Q96G97 398 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 WDR61Q9GZS3 305 aaKnown RBP13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 FBXL15Q9H469 300 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 PARP11Q9NR21 331 aa13.43□□□□□ -0.26
TRAPPC3-209ENST00000616395 PPIFP30405 207 aaKnown RBP13.42□□□□□ -0.26
TRAPPC3-209ENST00000616395 C5orf64Q2M2E5 130 aa13.42□□□□□ -0.26
TRAPPC3-209ENST00000616395 VWC2Q2TAL6 325 aa13.42□□□□□ -0.26
TRAPPC3-209ENST00000616395 COMMD7Q86VX2 200 aa13.42□□□□□ -0.26
TRAPPC3-209ENST00000616395 ABHD5Q8WTS1 349 aa13.42□□□□□ -0.26
TRAPPC3-209ENST00000616395 CACNG8Q8WXS5 425 aa13.42□□□□□ -0.26
TRAPPC3-209ENST00000616395 SLC35E1Q96K37 410 aa13.42□□□□□ -0.26
TRAPPC3-209ENST00000616395 ZNF580Q9UK33 172 aa13.42□□□□□ -0.26
TRAPPC3-209ENST00000616395 HBE1P02100 147 aa13.41□□□□□ -0.26
TRAPPC3-209ENST00000616395 OR13C7P0DN81 318 aa13.41□□□□□ -0.26
TRAPPC3-209ENST00000616395 FGF7P21781 194 aa13.41□□□□□ -0.26
TRAPPC3-209ENST00000616395 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC3-209ENST00000616395 AKR1C1Q04828 323 aa13.41□□□□□ -0.26
TRAPPC3-209ENST00000616395 TMEM182Q6ZP80 229 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC3-209ENST00000616395 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
TRAPPC3-209ENST00000616395 FAM110AQ9BQ89 295 aa13.41□□□□□ -0.26
TRAPPC3-209ENST00000616395 PMS2P5A8MQ11 134 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms