RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 PET117Q6UWS5 81 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 WDR86Q86TI4 376 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 MYOZ3Q8TDC0 251 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 SGK494Q96LW2 274 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 RARRES2Q99969 163 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 RNF126Q9BV68 326 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 ZNF581Q9P0T4 197 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 HSPB8Q9UJY1 196 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 WDR83OSQ9Y284 106 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 LRRK1Q38SD2 2015 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 TRGC2P03986 189 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 LOXP28300 417 aaPredicted RBP7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 TDGF1P3P51864 188 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 CR1LQ2VPA4 569 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 CENPWQ5EE01 88 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 SRSF8Q9BRL6 282 aaKnown RBP7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 OTORQ9NRC9 128 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 DCAF16Q9NXF7 216 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 ZGRF1Q86YA3 2104 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 RPLP1P05386 114 aaKnown RBP7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 CD5P06127 495 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 CKS2P33552 79 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 SCGB1D4Q6XE38 83 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 HS3ST6Q96QI5 342 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 CDC42EP3Q9UKI2 254 aa7.71□□□□□ -1.17
CLTCL1-208ENST00000615606 COL4A3Q01955 1670 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 A0A0B4J293 547 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 LINC00473A8K010 186 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 E9PQ18 207 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 HLA-DQA1P01909 254 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 PGLYRP4Q96LB8 373 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 REG4Q9BYZ8 158 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 TRBV7-1A0A0A6YYK4 115 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 PAX1P15863 534 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 ADORA2A-AS1P86434 159 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 LYRM7Q5U5X0 104 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 OR8A1Q8NGG7 326 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 FMC1Q96HJ9 113 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 Q9H3A6 140 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 PRORYQ9H606 182 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 KAAG1Q9UBP8 84 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 RNF114Q9Y508 228 aa7.71□□□□□ -1.18
CLTCL1-208ENST00000615606 A0A1B0GWJ7 208 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 UBE2L6O14933 153 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 IGKV1-5P01602 117 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 SOD3P08294 240 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 C21orf62-AS1Q17RA5 79 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 NMSQ5H8A3 153 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 AMMECR1LQ6DCA0 310 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 STHQ8IWL8 128 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 KIR3DL3Q8N743 410 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 MAPK1IP1LQ8NDC0 245 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 TBX15Q96SF7 602 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 DIRC3C9JPN6 131 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 VENTXO95231 258 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 ASIPP42127 132 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 SUPT4H1P63272 117 aaKnown RBP7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 RELBQ01201 579 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 RUSC1-AS1Q66K80 236 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 F11RQ9Y624 299 aaKnown RBP7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 FAM223BA6NKX1 122 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 GTSCR1Q86UQ5 136 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 FAM223AQ8IWN6 122 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 DUX3Q96PT4 197 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 IGLV3-1P01715 115 aa7.7□□□□□ -1.18
CLTCL1-208ENST00000615606 MPDZO75970 2070 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 ZNF585BQ52M93 769 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 TMEM190Q8WZ59 177 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 OTOGLQ3ZCN5 2332 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 LEPP41159 167 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 ZNF343Q6P1L6 599 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 C5orf24Q7Z6I8 188 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 LINC00311Q8N616 119 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 SPOCK3Q9BQ16 436 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 H0YIZ8 118 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 TAS2R60P59551 318 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 DOCK7Q96N67 2140 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 IFITM10A6NMD0 228 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 ZNF56Q15929 161 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 CIARTQ8N365 385 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 LINC01587Q99440 93 aa7.69□□□□□ -1.18
CLTCL1-208ENST00000615606 TRAV3A0A0B4J244 114 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 SAP30O75446 220 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 DAZAP2Q15038 168 aaPredicted RBP7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 DEFB113Q30KQ7 82 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 PIP4P2Q8N4L2 257 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 TRGV9Q99603 122 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 PSMB2P49721 201 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 GTF3C1Q12789 2109 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 ZNF562Q6V9R5 426 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 LINC00518Q8N0U6 118 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 Q8NA96 180 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 SFRP2Q96HF1 295 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 C1orf147Q96MC9 270 aaPredicted RBP7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 HSPB9Q9BQS6 159 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 AP5S1Q9NUS5 200 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 H7C1H1 209 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 RNF224P0DH78 156 aa7.68□□□□□ -1.18
CLTCL1-208ENST00000615606 COL5A1-AS1Q5SY13 56 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms