RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 SLC7A6OSQ96CW6 309 aaPredicted RBP4.6□□□□□ -1.67
MUC1-227ENST00000615517 NARS2Q96I59 477 aaKnown RBP4.6□□□□□ -1.67
MUC1-227ENST00000615517 LINC00052Q96N35 136 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 SCPEP1Q9HB40 452 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 RAB22AQ9UL26 194 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 A0A0J9YX75 114 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 IRGMA1A4Y4 181 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 EFCAB10A6NFE3 127 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 H3BNG1 76 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 GYG2O15488 501 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 BUB3O43684 328 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 NXPH4O95158 308 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 KRASP01116 189 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 LPAR6P43657 344 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 ERVK-16P61578 105 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 ST3GAL4Q11206 333 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 CATR1Q13166 79 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 LELP1Q5T871 98 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 SCXQ7RTU7 201 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 TPRA1Q86W33 373 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 ZBTB34Q8NCN2 500 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 FCAMRQ8WWV6 532 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 VSIG2Q96IQ7 327 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 ARGLU1Q9NWB6 273 aaPredicted RBP4.59□□□□□ -1.67
MUC1-227ENST00000615517 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 PRNDQ9UKY0 176 aa4.59□□□□□ -1.67
MUC1-227ENST00000615517 NPIPB6E9PJ23 425 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 M0R2Z0 102 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 SSX5O60225 188 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 SNAPC5O75971 98 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 GADD45AP24522 165 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 FCGR2CP31995 323 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 WNT4P56705 351 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 PRCDQ00LT1 54 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 KIR3DS1Q14943 382 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 DNAL1Q4LDG9 190 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 SPINK9Q5DT21 86 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 HES5Q5TA89 166 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 AADACL3Q5VUY0 350 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 BAP18Q8IXM2 172 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 MS4A15Q8N5U1 240 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 LINC00612Q8N6U2 182 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 Q8N814 137 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 OR4X1Q8NH49 305 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 NUDCD2Q8WVJ2 157 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 DAZAP1Q96EP5 407 aaKnown RBP4.58□□□□□ -1.68
MUC1-227ENST00000615517 C20orf173Q96LM9 149 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 ABHD1Q96SE0 405 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 SLC5A7Q9GZV3 580 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 NOP10Q9NPE3 64 aaKnown RBP4.58□□□□□ -1.68
MUC1-227ENST00000615517 FAM212BQ9NTI7 297 aaPredicted RBP4.58□□□□□ -1.68
MUC1-227ENST00000615517 FKBP11Q9NYL4 201 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 ANXA10Q9UJ72 324 aa4.58□□□□□ -1.68
MUC1-227ENST00000615517 SCGB1D2O95969 90 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 PPYP01298 95 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 INSP01308 110 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 F2RP25116 425 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 PSMB3P49720 205 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 FXYD4P59646 89 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 ODF1Q14990 250 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 SPINK13Q1W4C9 94 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 CDNFQ49AH0 187 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 HACD4Q5VWC8 232 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 SPATA31B1PQ5VZV4 182 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 EBLN2Q6P2I7 272 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 TMEM91Q6ZNR0 172 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 TMED4Q7Z7H5 227 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 NANOGP1Q8N7R0 232 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 BPIFB6Q8NFQ5 453 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 OR11H7Q8NGC8 314 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 GPR146Q96CH1 333 aa4.57□□□□□ -1.68
MUC1-227ENST00000615517 TIMM8BQ9Y5J9 83 aaPredicted RBP4.57□□□□□ -1.68
MUC1-227ENST00000615517 TRAV12-2A0A075B6T6 113 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 MYL12BO14950 172 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 PGLYRP1O75594 196 aaPredicted RBP4.56□□□□□ -1.68
MUC1-227ENST00000615517 RLN1P04808 185 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 IGLC1P0CG04 106 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 RNASE2P10153 161 aaKnown RBP4.56□□□□□ -1.68
MUC1-227ENST00000615517 HSPE1P61604 102 aaKnown RBP4.56□□□□□ -1.68
MUC1-227ENST00000615517 GNGT1P63211 74 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 ERHP84090 104 aaKnown RBP4.56□□□□□ -1.68
MUC1-227ENST00000615517 DHODHQ02127 395 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 C4orf46Q504U0 113 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 OR10J6PQ8NGY7 276 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 OR6F1Q8NGZ6 308 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 COQ8AQ8NI60 647 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 RNASE8Q8TDE3 154 aaKnown RBP4.56□□□□□ -1.68
MUC1-227ENST00000615517 C16orf74Q96GX8 76 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 DOK5Q9P104 306 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 KLK11Q9UBX7 282 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 V9GY05 133 aa4.56□□□□□ -1.68
MUC1-227ENST00000615517 GAGE12BA1L429 117 aa4.55□□□□□ -1.68
MUC1-227ENST00000615517 TMEM235A6NFC5 223 aa4.55□□□□□ -1.68
MUC1-227ENST00000615517 RS1O15537 224 aa4.55□□□□□ -1.68
MUC1-227ENST00000615517 GAGE7O76087 117 aa4.55□□□□□ -1.68
MUC1-227ENST00000615517 IGKV1-39P01597 117 aa4.55□□□□□ -1.68
MUC1-227ENST00000615517 IGKV1D-39P04432 117 aa4.55□□□□□ -1.68
MUC1-227ENST00000615517 IL4P05112 153 aa4.55□□□□□ -1.68
MUC1-227ENST00000615517 GAGE12FP0CL80 117 aa4.55□□□□□ -1.68
MUC1-227ENST00000615517 GAGE12GP0CL81 117 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms