RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 ST6GALNAC6Q969X2 333 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 SERF1AO75920 110 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 JKAMPQ9P055 326 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 APOHP02749 345 aaPredicted RBP12.16□□□□□ -0.46
SNPH-203ENST00000614659 SGK494Q96LW2 274 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 NRN1Q9NPD7 142 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 TMEM160Q9NX00 188 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 EPDR1Q9UM22 224 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 NUP210Q8TEM1 1887 aaPredicted RBP12.15□□□□□ -0.46
SNPH-203ENST00000614659 TMEM155Q4W5P6 130 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 TEX38Q6PEX7 206 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 GGTLC1Q9BX51 225 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 DERL1Q9BUN8 251 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 TRBV20OR9-2A0A075B6H5 130 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 C5orf63A6NC05 138 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 SLC50A1Q9BRV3 221 aa12.15□□□□□ -0.46
SNPH-203ENST00000614659 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
SNPH-203ENST00000614659 CD55P08174 381 aa12.15□□□□□ -0.47
SNPH-203ENST00000614659 TCF23Q7RTU1 214 aa12.15□□□□□ -0.47
SNPH-203ENST00000614659 LURAP1LQ8IV03 231 aa12.15□□□□□ -0.47
SNPH-203ENST00000614659 MOB4Q9Y3A3 225 aa12.15□□□□□ -0.47
SNPH-203ENST00000614659 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 FBLN7Q53RD9 439 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 PAPPA-AS1Q5QFB9 102 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 A6NNC1 897 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 ADMP35318 185 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 FOXG1P55316 489 aaPredicted RBP12.14□□□□□ -0.47
SNPH-203ENST00000614659 C5orf30Q96GV9 206 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 VSIRQ9H7M9 311 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 ATP5LO75964 103 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 CRIM1Q9NZV1 1036 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 FAM181BA6NEQ2 426 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 H3BTX0 84 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 GPX1P07203 203 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 SRD5A1P18405 259 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 NCOR1P1Q9H4R4 102 aa12.14□□□□□ -0.47
SNPH-203ENST00000614659 UBE2L6O14933 153 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 GPR183P32249 361 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 TICRRQ7Z2Z1 1910 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 CA1P00915 261 aaPredicted RBP12.13□□□□□ -0.47
SNPH-203ENST00000614659 CCL3L1P16619 93 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 FAM19A2Q8N3H0 131 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 C1orf147Q96MC9 270 aaPredicted RBP12.13□□□□□ -0.47
SNPH-203ENST00000614659 KIR2DL4Q99706 377 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 TRAV40A0A0B4J280 105 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 CGB1A6NKQ9 187 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 CD177Q8N6Q3 437 aa12.13□□□□□ -0.47
SNPH-203ENST00000614659 SNAI2O43623 268 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 PSPNO60542 156 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 PAX1P15863 534 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 RNF144BQ7Z419 303 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 HIST3H2BBQ8N257 126 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 TMEM167AQ8TBQ9 72 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 HIST1H2BLQ99880 126 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 BEX4Q9NWD9 120 aaPredicted RBP12.12□□□□□ -0.47
SNPH-203ENST00000614659 PLA2G5P39877 138 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 SRSF6Q13247 344 aaKnown RBP12.12□□□□□ -0.47
SNPH-203ENST00000614659 OCC1Q8TAD7 63 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 LILRA1O75019 489 aa12.12□□□□□ -0.47
SNPH-203ENST00000614659 CHCHD1Q96BP2 118 aaKnown RBP12.12□□□□□ -0.47
SNPH-203ENST00000614659 TRAV9-2A0A087WT02 112 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 FOXI3A8MTJ6 420 aaPredicted RBP12.11□□□□□ -0.47
SNPH-203ENST00000614659 HIGD1CA8MV81 97 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 H3BUT2 72 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 TSKUQ8WUA8 353 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 ASCL2Q99929 193 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 MBNL3Q9NUK0 354 aaKnown RBP12.11□□□□□ -0.47
SNPH-203ENST00000614659 RNF114Q9Y508 228 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 GCSAMLQ5JQS6 135 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 ORMDL3Q8N138 153 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 ASIPP42127 132 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 SPTBP11277 2137 aa12.11□□□□□ -0.47
SNPH-203ENST00000614659 TRGV9Q99603 122 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 IGKV3-15P01624 115 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 HGFACQ04756 655 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 GTSCR1Q86UQ5 136 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 RNF125Q96EQ8 232 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 APC2O95996 2303 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 IGLV3-1P01715 115 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 SLC25A48Q6ZT89 311 aaKnown RBP12.1□□□□□ -0.47
SNPH-203ENST00000614659 RPP25LQ8N5L8 163 aaKnown RBP12.1□□□□□ -0.47
SNPH-203ENST00000614659 OR5A1Q8NGJ0 315 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 MGST2Q99735 147 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 IGHV3OR16-12A0A075B7B8 117 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 LINC01559Q495D7 138 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 FOXC2Q99958 501 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 RALGAPA1Q6GYQ0 2036 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 J3QLI3 93 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 GATA2P23769 480 aaPredicted RBP12.1□□□□□ -0.47
SNPH-203ENST00000614659 CEACAM8P31997 349 aaPredicted RBP12.1□□□□□ -0.47
SNPH-203ENST00000614659 MST1LQ2TV78 715 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 MEIG1Q5JSS6 88 aa12.1□□□□□ -0.47
SNPH-203ENST00000614659 ACTL10Q5JWF8 245 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms