RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 FLVCR2Q9UPI3 526 aa9□□□□□ -0.97
PDLIM2-218ENST00000614502 IGHV3OR16-8A0A075B7F1 116 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 PIGBOS1A0A0B4J2F0 54 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 DUXBA0A1W2PPF3 345 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 VAMP1P23763 118 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 SPCS3P61009 180 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 ZNF846Q147U1 533 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 SPINK9Q5DT21 86 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 ZNF600Q6ZNG1 722 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 GATAD1Q8WUU5 269 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 WDR12Q9GZL7 423 aaKnown RBP8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 CSTL1Q9H114 145 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 CACNG5Q9UF02 275 aa8.99□□□□□ -0.97
PDLIM2-218ENST00000614502 TRAV2A0A0B4J234 112 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 A0A1W2PS18 150 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 MPTX1A8MV57 137 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 DNASE2O00115 360 aaPredicted RBP8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 DFFBO76075 338 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 SULT1A3P0DMM9 295 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 SULT1A4P0DMN0 295 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 RPL35AP18077 110 aaKnown RBP8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 PMS2P11Q13670 270 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 PVRIGQ6DKI7 326 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 TCF24Q7RTU0 167 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 NARS2Q96I59 477 aaKnown RBP8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 CACFD1Q9UGQ2 172 aa8.98□□□□□ -0.97
PDLIM2-218ENST00000614502 TRAV30A0A087WSZ9 112 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 A0A1B0GU03 582 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 C9orf170A2RU37 121 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 UPK1BO75841 260 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 TMEM50AO95807 157 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 TCRBP04435 133 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 OR4E1P0C645 316 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 TFPI2P48307 235 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 HOXA1P49639 335 aaPredicted RBP8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 SMCO1Q147U7 214 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 FAM90A2PQ658T7 463 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 CEMP1Q6PRD7 247 aaPredicted RBP8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 TOMM20LQ6UXN7 152 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 LINC00476Q8WZB0 136 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 VSIRQ9H7M9 311 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 TBC1D24Q9ULP9 559 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 TMED3Q9Y3Q3 217 aa8.97□□□□□ -0.97
PDLIM2-218ENST00000614502 IGKV3-7A0A075B6H7 116 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 RPS10-NUDT3A0A1W2PQS6 291 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 PITX3O75364 302 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 LY6G6CO95867 125 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 RNASE2P10153 161 aaKnown RBP8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 SLC25A6P12236 298 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 ANXA7P20073 488 aaKnown RBP8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 NPPCP23582 126 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 IFITM3Q01628 133 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 DHRS2Q13268 280 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 ASAH1Q13510 395 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 BSXQ3C1V8 233 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 APRG1Q8IVJ8 170 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 RARRES2Q99969 163 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 MFFQ9GZY8 342 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 C20orf85Q9H1P6 137 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 HSPB7Q9UBY9 170 aa8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 PUS1Q9Y606 427 aaKnown RBP eCLIP8.96□□□□□ -0.98
PDLIM2-218ENST00000614502 IGHV3-49A0A0A0MS15 119 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 CEBPZOSA8MTT3 80 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 CLN5O75503 358 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 IGHV3-48P01763 117 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 OPRK1P41145 380 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 HTR2BP41595 481 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 EIF2B2P49770 351 aaKnown RBP8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 RPL11P62913 178 aaKnown RBP8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 TMEM41BQ5BJD5 291 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 GBGT1Q8N5D6 347 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 OR4X1Q8NH49 305 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 GRAMD2BQ96HH9 432 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 ZNF414Q96IQ9 312 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 METTL26Q96S19 204 aa8.95□□□□□ -0.98
PDLIM2-218ENST00000614502 FAM240BA0A1B0GVZ2 78 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 NXPH3O95157 252 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 HOXB5P09067 269 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 C4orf46Q504U0 113 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 C2orf83Q53S99 150 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 GGNBP1Q5YKI7 109 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 MZT2BQ6NZ67 158 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 NOXA1Q86UR1 476 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 OR1S1Q8NH92 325 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 COQ8AQ8NI60 647 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 ST8SIA2Q92186 375 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 MS4A6AQ9H2W1 248 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 ZFAND3Q9H8U3 227 aa8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 HEYLQ9NQ87 328 aaPredicted RBP8.94□□□□□ -0.98
PDLIM2-218ENST00000614502 TRAV6A0A075B6T7 132 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 IGHV3OR16-13A0A075B7E8 117 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 IGHV3-74A0A0B4J1X5 117 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 FAM90A26D6RGX4 464 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 ADAP1O75689 374 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 SLC25A4P12235 298 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 EWSR1Q01844 656 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 ETFRF1Q6IPR1 90 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 STHQ8IWL8 128 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 OR11H2Q8NH07 326 aa8.93□□□□□ -0.98
PDLIM2-218ENST00000614502 DTD1Q8TEA8 209 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms