RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 IFNA21P01568 189 aa13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 IFNA4P05014 189 aa13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 ATP5IP56385 69 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 ASAH1Q13510 395 aa13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 LAMTOR1Q6IAA8 161 aa13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 MITD1Q8WV92 249 aa13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 CIB3Q96Q77 187 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 RHPN1-AS1Q9BWJ2 59 aa13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 MAGT1Q9H0U3 335 aa13.55□□□□□ -0.24
SEMA3B-211ENST00000612509 FAM240BA0A1B0GVZ2 78 aa13.54□□□□□ -0.24
SEMA3B-211ENST00000612509 OR10J1P30954 320 aa13.54□□□□□ -0.24
SEMA3B-211ENST00000612509 MZT2BQ6NZ67 158 aa13.54□□□□□ -0.24
SEMA3B-211ENST00000612509 ACY3Q96HD9 319 aa13.54□□□□□ -0.24
SEMA3B-211ENST00000612509 RNF2Q99496 336 aa13.54□□□□□ -0.24
SEMA3B-211ENST00000612509 TUBA4BQ9H853 241 aa13.54□□□□□ -0.24
SEMA3B-211ENST00000612509 IGHV3OR16-13A0A075B7E8 117 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 IGHV3-74A0A0B4J1X5 117 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 OR11H12B2RN74 326 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 BMI1P35226 326 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 DEFB125Q8N687 156 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 OR4D5Q8NGN0 318 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 NPIPB3Q92617 1050 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 SRD5A3Q9H8P0 318 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 U3KQK5 164 aa13.53□□□□□ -0.24
SEMA3B-211ENST00000612509 WRBO00258 174 aa13.52□□□□□ -0.25
SEMA3B-211ENST00000612509 NKX2-1P43699 371 aaPredicted RBP13.52□□□□□ -0.25
SEMA3B-211ENST00000612509 RAB11AP62491 216 aa13.52□□□□□ -0.25
SEMA3B-211ENST00000612509 ST8SIA2Q92186 375 aa13.52□□□□□ -0.25
SEMA3B-211ENST00000612509 SLC35E1Q96K37 410 aa13.52□□□□□ -0.25
SEMA3B-211ENST00000612509 SEC22CQ9BRL7 303 aa13.52□□□□□ -0.25
SEMA3B-211ENST00000612509 VSIRQ9H7M9 311 aa13.52□□□□□ -0.25
SEMA3B-211ENST00000612509 PAIP2BQ9ULR5 123 aaKnown RBP13.52□□□□□ -0.25
SEMA3B-211ENST00000612509 H3BP45 60 aa13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 APOHP02749 345 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 H2AFB2P0C5Z0 115 aa13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 GPX4P36969 197 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 YPEL3P61236 119 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 POLR2GP62487 172 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 RPP30P78346 268 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 IFITM3Q01628 133 aa13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 ID3Q02535 119 aa13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 IAH1Q2TAA2 248 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 ENKURQ8TC29 256 aa13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 ZNF431Q8TF32 576 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 METTL26Q96S19 204 aa13.51□□□□□ -0.25
SEMA3B-211ENST00000612509 OR4C46A6NHA9 309 aa13.5□□□□□ -0.25
SEMA3B-211ENST00000612509 SSSCA1O60232 199 aa13.5□□□□□ -0.25
SEMA3B-211ENST00000612509 TM2D3Q9BRN9 247 aa13.5□□□□□ -0.25
SEMA3B-211ENST00000612509 IGHV3-66A0A0C4DH42 116 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 PRSS46E5RG02 174 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 CCSO14618 274 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 SCGB1D2O95969 90 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 TOMM40O96008 361 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 GAMTQ14353 236 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 HAGHQ16775 308 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 SPANXN5Q5MJ07 72 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 FAM90A2PQ658T7 463 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 LINC00322Q6ZN03 302 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 TCF24Q7RTU0 167 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 ZBTB8BQ8NAP8 495 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 Q8WTZ3 238 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 RCHY1Q96PM5 261 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 TMEM231Q9H6L2 316 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 ZMAT4Q9H898 229 aa13.49□□□□□ -0.25
SEMA3B-211ENST00000612509 RBMY1BA6NDE4 496 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 RBMY1EA6NEQ0 496 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 IL4P05112 153 aa13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 RBMY1DP0C7P1 496 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 NPPCP23582 126 aa13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 CRYBB3P26998 211 aa13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 ODF3L2Q3SX64 289 aa13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 UBQLN2Q9UHD9 624 aa13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 STRAPQ9Y3F4 350 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-211ENST00000612509 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 IGKV1D-37A0A075B6S9 117 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 A0A1W2PS18 150 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 ZFP92A6NM28 416 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 CD5P06127 495 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 USF2Q15853 346 aaPredicted RBP13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 LILRB2Q8N423 598 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 C12orf45Q8N5I9 185 aaPredicted RBP13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 NARS2Q96I59 477 aaKnown RBP13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 WWC2-AS2Q96NR7 200 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 PSENENQ9NZ42 101 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 GSKIPQ9P0R6 139 aa13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 RCL1Q9Y2P8 373 aaKnown RBP13.47□□□□□ -0.25
SEMA3B-211ENST00000612509 DFFBO76075 338 aa13.46□□□□□ -0.25
SEMA3B-211ENST00000612509 HNRNPCP07910 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEMA3B-211ENST00000612509 RD3LP0DJH9 198 aa13.46□□□□□ -0.25
SEMA3B-211ENST00000612509 PSG1P11464 419 aa13.46□□□□□ -0.25
SEMA3B-211ENST00000612509 P2RY1P47900 373 aa13.46□□□□□ -0.25
SEMA3B-211ENST00000612509 TFPI2P48307 235 aa13.46□□□□□ -0.25
SEMA3B-211ENST00000612509 CITED4Q96RK1 184 aa13.46□□□□□ -0.25
SEMA3B-211ENST00000612509 FAM110AQ9BQ89 295 aa13.46□□□□□ -0.25
SEMA3B-211ENST00000612509 FAM25EA8MYX2 175 aa13.45□□□□□ -0.26
SEMA3B-211ENST00000612509 IL5P05113 134 aa13.45□□□□□ -0.26
SEMA3B-211ENST00000612509 ACOT7LQ6ZUV0 252 aa13.45□□□□□ -0.26
SEMA3B-211ENST00000612509 NRARPQ7Z6K4 114 aa13.45□□□□□ -0.26
SEMA3B-211ENST00000612509 GBGT1Q8N5D6 347 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms