RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 LOXP28300 417 aaPredicted RBP5.2□□□□□ -1.58
SNX13-213ENST00000611725 TCF23Q7RTU1 214 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 LSM4Q9Y4Z0 139 aaKnown RBP5.2□□□□□ -1.58
SNX13-213ENST00000611725 SRRM4A7MD48 611 aaKnown RBP5.2□□□□□ -1.58
SNX13-213ENST00000611725 M0R143 59 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 C3orf36Q3SXR2 165 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 REC114Q7Z4M0 266 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 TEX45Q8NA69 505 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 TRBV9A0A0B4J1U6 114 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 TRAV5A0A0B4J249 113 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 TCRBV4S1A1TA0A5B7 111 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 PEX7O00628 323 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 KLRB1Q12918 225 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 TEX36Q5VZQ5 186 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 LYPD2Q6UXB3 125 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 RNASE7Q9H1E1 156 aaKnown RBP5.19□□□□□ -1.58
SNX13-213ENST00000611725 TRBV20OR9-2A0A075B6H5 130 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 ISLRO14498 428 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 PRR30Q53SZ7 412 aaPredicted RBP5.19□□□□□ -1.58
SNX13-213ENST00000611725 SPRNQ5BIV9 151 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 BEND2Q8NDZ0 799 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 NEUROG1Q92886 237 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 YTHDF2Q9Y5A9 579 aaKnown RBP5.19□□□□□ -1.58
SNX13-213ENST00000611725 LY96Q9Y6Y9 160 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 FNDC10F2Z333 226 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 APCSP02743 223 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 NPPCP23582 126 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 WT1-ASQ06250 92 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 VN1R17PQ8TDU5 208 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 NDFIP1Q9BT67 221 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 JMJD1CQ15652 2540 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 IL4P05112 153 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 DDB2Q92466 427 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 CHODLQ9H9P2 273 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 PAM16Q9Y3D7 125 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 ZNF292O60281 2723 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 IFITM10A6NMD0 228 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 SERF1AO75920 110 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 LHBP01229 141 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 CSN3P07498 182 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 ZNF672Q499Z4 452 aaPredicted RBP5.19□□□□□ -1.58
SNX13-213ENST00000611725 ARL2-SNX15V9GYD0 113 aa5.19□□□□□ -1.58
SNX13-213ENST00000611725 TBR1Q16650 682 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 ZNF114Q8NC26 417 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 NAGKQ9UJ70 344 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 DIRC3C9JPN6 131 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 ZNF137PP52743 207 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 C11orf52Q96A22 123 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 DOPEY1Q5JWR5 2465 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 IGHV2-26A0A0B4J1V2 119 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 TIMM23O14925 209 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 GOLT1AQ6ZVE7 132 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 FOXA3P55318 350 aaPredicted RBP5.18□□□□□ -1.58
SNX13-213ENST00000611725 TMEM256Q8N2U0 113 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 NDUFA4L2Q9NRX3 87 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 CDC42EP3Q9UKI2 254 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 LOC105371242A0A075B767 164 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 A0A1W2PPI3 338 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 E7EQL1 145 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 ST6GALNAC3Q8NDV1 305 aa5.18□□□□□ -1.58
SNX13-213ENST00000611725 IGHV3-35A0A0C4DH35 117 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 NBL1P41271 181 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 AARDQ4LEZ3 155 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 C22orf34Q6ZV56 151 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 OR5R1Q8NH85 324 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 KAAG1Q9UBP8 84 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 CA1P00915 261 aaPredicted RBP5.17□□□□□ -1.58
SNX13-213ENST00000611725 RPL7P18124 248 aaKnown RBP5.17□□□□□ -1.58
SNX13-213ENST00000611725 TCF15Q12870 199 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 RBM14Q96PK6 669 aaKnown RBP5.17□□□□□ -1.58
SNX13-213ENST00000611725 CBLN4Q9NTU7 201 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 FASNP49327 2511 aaKnown RBP5.17□□□□□ -1.58
SNX13-213ENST00000611725 H0Y8G0 127 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 FAM71F2Q6NXP2 309 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 LINC00311Q8N616 119 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 OR4B1Q8NGF8 309 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 GNB4Q9HAV0 340 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 LPAR2Q9HBW0 351 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 TMSB15BA0A087X1C1 80 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 GGTLC3B5MD39 225 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 M0R2Z0 102 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 NBR2O15453 112 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 CD33P20138 364 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 CD24P25063 80 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 MFAP4P55083 255 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 ECSCRQ19T08 205 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 UTF1Q5T230 341 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 LEMD1Q68G75 181 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 FA2HQ7L5A8 372 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 C2orf88Q9BSF0 95 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 WNT10AQ9GZT5 417 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 FNDC4Q9H6D8 234 aaPredicted RBP5.17□□□□□ -1.58
SNX13-213ENST00000611725 PRUNE2Q8WUY3 3088 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 AMY1AP04745 511 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 FCGR2BP31994 310 aaPredicted RBP5.17□□□□□ -1.58
SNX13-213ENST00000611725 HNRNPA3P51991 378 aaKnown RBP5.17□□□□□ -1.58
SNX13-213ENST00000611725 PRSS33Q8NF86 280 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 PRSS3P2Q8NHM4 247 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 NEU1Q99519 415 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 EPDR1Q9UM22 224 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms