RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 OR1S2Q8NGQ3 325 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 GLMPQ8WWB7 406 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 GOLT1BQ9Y3E0 138 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 HBE1P02100 147 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 PGAM2P15259 253 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 NAT1P18440 290 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 RPL5P46777 297 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 FXYD7P58549 80 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 MLANAQ16655 118 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 IZUMO2Q6UXV1 221 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 CROCCP3Q8IVE0 287 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 SPARTQ8N0X7 666 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 FNDC4Q9H6D8 234 aaPredicted RBP12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 MRPL36Q9P0J6 103 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
CHMP4A-211ENST00000609024 IGKV1-17P01599 117 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 IL4P05112 153 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 NKX2-1P43699 371 aaPredicted RBP12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 DAD1P61803 113 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 OXA1LQ15070 435 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 Q8N1X5 172 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 C6orf223Q8N319 242 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 RRNAD1Q96FB5 475 aaKnown RBP12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 LINC00052Q96N35 136 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 SCRT2Q9NQ03 307 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 PFDN2Q9UHV9 154 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 ANAPC10Q9UM13 185 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 U3KQE9 123 aa12.33□□□□□ -0.44
CHMP4A-211ENST00000609024 OR10J1P30954 320 aa12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 ID1P41134 155 aa12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 UCP3P55916 312 aa12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 DHODHQ02127 395 aa12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 OR4B1Q8NGF8 309 aa12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 YTHDF1Q9BYJ9 559 aaKnown RBP12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
CHMP4A-211ENST00000609024 A0A0B4J293 547 aa12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 LOC102723971A0A1B0GUV8 181 aa12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 SLC25A4P12235 298 aa12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 RND2P52198 227 aa12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 YPEL3P61236 119 aaPredicted RBP12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 LYSMD2Q8IV50 215 aa12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 SAMD12Q8N8I0 201 aa12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 TMEM208Q9BTX3 173 aa12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 HSPG2P98160 4391 aa12.31□□□□□ -0.44
CHMP4A-211ENST00000609024 SMIM31A0A1B0GVY4 71 aa12.3□□□□□ -0.44
CHMP4A-211ENST00000609024 IGKV1-5P01602 117 aa12.3□□□□□ -0.44
CHMP4A-211ENST00000609024 NUP62P37198 522 aaPredicted RBP12.3□□□□□ -0.44
CHMP4A-211ENST00000609024 HTR2BP41595 481 aa12.3□□□□□ -0.44
CHMP4A-211ENST00000609024 RRN3P1Q2M238 152 aa12.3□□□□□ -0.44
CHMP4A-211ENST00000609024 ETFRF1Q6IPR1 90 aa12.3□□□□□ -0.44
CHMP4A-211ENST00000609024 MAGT1Q9H0U3 335 aa12.3□□□□□ -0.44
CHMP4A-211ENST00000609024 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
CHMP4A-211ENST00000609024 NBDYA0A0U1RRE5 68 aa12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 IGLC1P0CG04 106 aa12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 RD3LP0DJH9 198 aa12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 RCVRNP35243 200 aa12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 FOXI2Q6ZQN5 318 aa12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 ZNF486Q96H40 463 aaPredicted RBP12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 SAV1Q9H4B6 383 aaPredicted RBP12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 SCPEP1Q9HB40 452 aa12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 RAB26Q9ULW5 256 aa12.29□□□□□ -0.44
CHMP4A-211ENST00000609024 NACAE9PAV3 2078 aa12.28□□□□□ -0.44
CHMP4A-211ENST00000609024 ANKRD65E5RJM6 399 aa12.28□□□□□ -0.44
CHMP4A-211ENST00000609024 BUB3O43684 328 aa12.28□□□□□ -0.44
CHMP4A-211ENST00000609024 PIGPP57054 158 aa12.28□□□□□ -0.44
CHMP4A-211ENST00000609024 USF2Q15853 346 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-211ENST00000609024 GDF5OSQ5U4N7 250 aa12.28□□□□□ -0.44
CHMP4A-211ENST00000609024 SPATA31B1PQ5VZV4 182 aa12.28□□□□□ -0.44
CHMP4A-211ENST00000609024 PRSS54Q6PEW0 395 aa12.28□□□□□ -0.44
CHMP4A-211ENST00000609024 C3orf85A0A1B0GTC6 90 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 M0QYG6 137 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 NUDT3O95989 172 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 CCL18P55774 89 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 SPCS3P61009 180 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 RND3P61587 244 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 PSG9Q00887 426 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 RNASEH2CQ8TDP1 164 aaKnown RBP12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 TP53RKQ96S44 253 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 PBDC1Q9BVG4 233 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 COPZ2Q9P299 210 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 KLK11Q9UBX7 282 aa12.27□□□□□ -0.45
CHMP4A-211ENST00000609024 TOMM40O96008 361 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 PI3P19957 117 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 PSMB3P49720 205 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 RORCP51449 518 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 SPATA12Q7Z6I5 190 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 NOXA1Q86UR1 476 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 GPX8Q8TED1 209 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 ACY3Q96HD9 319 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 SLC35B3Q9H1N7 401 aa12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.26□□□□□ -0.45
CHMP4A-211ENST00000609024 CEBPZOSA8MTT3 80 aa12.25□□□□□ -0.45
CHMP4A-211ENST00000609024 P0C879 139 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms