RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 HSD17B11Q8NBQ5 300 aa8.89□□□□□ -0.99
LINC00539-204ENST00000608957 OR1N2Q8NGR9 330 aa8.89□□□□□ -0.99
LINC00539-204ENST00000608957 OR1P1Q8NH06 330 aa8.89□□□□□ -0.99
LINC00539-204ENST00000608957 SCGB1C1Q8TD33 95 aa8.89□□□□□ -0.99
LINC00539-204ENST00000608957 RNASEH2CQ8TDP1 164 aaKnown RBP8.89□□□□□ -0.99
LINC00539-204ENST00000608957 MCRIP2Q9BUT9 160 aaKnown RBP8.89□□□□□ -0.99
LINC00539-204ENST00000608957 WDR61Q9GZS3 305 aaKnown RBP8.89□□□□□ -0.99
LINC00539-204ENST00000608957 F11RQ9Y624 299 aaKnown RBP8.89□□□□□ -0.99
LINC00539-204ENST00000608957 DNAH9Q9NYC9 4486 aa8.89□□□□□ -0.99
LINC00539-204ENST00000608957 SMCO3A2RU48 225 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 NPIPB5A8MRT5 1133 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 FNDC10F2Z333 226 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 CORTO00230 105 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 CTRB1P17538 263 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 FGF7P21781 194 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 ATP6V0CP27449 155 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 SLURP1P55000 103 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 CD69Q07108 199 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 ZNF616Q08AN1 781 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 AKIRIN2Q53H80 203 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 PVRIGQ6DKI7 326 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 CTRB2Q6GPI1 263 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 SLC16A13Q7RTY0 426 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 TMED6Q8WW62 240 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 MS4A10Q96PG2 267 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 GPR61Q9BZJ8 451 aa8.88□□□□□ -0.99
LINC00539-204ENST00000608957 IGHV4OR15-8A0A075B7B6 117 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 A0A087WW49 117 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 SEC14L6B5MCN3 397 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 IGHV3-11P01762 117 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 CRYGCP07315 174 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 LGALS1P09382 135 aaKnown RBP8.87□□□□□ -0.99
LINC00539-204ENST00000608957 SEC11BP0C7V7 166 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 SPP1P10451 314 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 OPRK1P41145 380 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 MFAP2P55001 183 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 DEFA5Q01523 94 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 FAM74A1Q5RGS3 127 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 C9orf66Q5T8R8 295 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 C19orf35Q6ZS72 473 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 OR1L6Q8NGR2 347 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 GNPNAT1Q96EK6 184 aaPredicted RBP8.87□□□□□ -0.99
LINC00539-204ENST00000608957 SH3BGRL3Q9H299 93 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 SLC25A32Q9H2D1 315 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 WDR83OSQ9Y284 106 aa8.87□□□□□ -0.99
LINC00539-204ENST00000608957 COL7A1Q02388 2944 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 RPS10-NUDT3A0A1W2PQS6 291 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 DEFA4P12838 97 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 GPX4P36969 197 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-204ENST00000608957 TPPP2P59282 170 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 AKR1C1Q04828 323 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 ETFRF1Q6IPR1 90 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 TTC9CQ8N5M4 171 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 OR5T1Q8NG75 326 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 CACNG8Q8WXS5 425 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 DPF1Q92782 380 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 DLX4Q92988 240 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-204ENST00000608957 MISP3Q96FF7 219 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 SLC35E1Q96K37 410 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 TMEM68Q96MH6 324 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 PRR25Q96S07 402 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 PSMG3Q9BT73 122 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-204ENST00000608957 RSG1Q9BU20 258 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 TIMM9Q9Y5J7 89 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 DMRT1Q9Y5R6 373 aa8.86□□□□□ -0.99
LINC00539-204ENST00000608957 CYB5BO43169 146 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 MPDU1O75352 247 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 SULT1A2P50226 295 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 RAB14P61106 215 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 DEFB121Q5J5C9 76 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 CLLU1Q5K131 121 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 BTNL8Q6UX41 500 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 TMEM182Q6ZP80 229 aaPredicted RBP8.85□□□□□ -0.99
LINC00539-204ENST00000608957 OR2G3Q8NGZ4 309 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 FNDC4Q9H6D8 234 aaPredicted RBP8.85□□□□□ -0.99
LINC00539-204ENST00000608957 NPVFQ9HCQ7 196 aa8.85□□□□□ -0.99
LINC00539-204ENST00000608957 IGLV11-55A0A075B6I3 123 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 C17orf112F2Z3M2 114 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 LINC01619G3V211 115 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 OVOL1O14753 267 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 MT-CO2P00403 227 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 TRGV3P03979 118 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 GAMTQ14353 236 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 TEPPQ6URK8 271 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 TMEM144Q7Z5S9 345 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 ZNF709Q8N972 641 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 LRRC20Q8TCA0 184 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 RNF141Q8WVD5 230 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 MGST2Q99735 147 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 LSM4Q9Y4Z0 139 aaKnown RBP8.84□□□□□ -0.99
LINC00539-204ENST00000608957 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
LINC00539-204ENST00000608957 UMAD1C9J7I0 102 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 H3BUA1 57 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 I3L2K1 104 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 PRH1P02810 166 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 HSPB1P04792 205 aaKnown RBP8.83□□□□□ -1
LINC00539-204ENST00000608957 NMBP08949 121 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 RAB5CP51148 216 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 AKR1C8PQ5T2L2 129 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms