RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	MRPL36	Q9P0J6	103 aa	Known RBP	7.92	□□□□□ -1.14
TPM2-208	ENST00000607559	HSPB7	Q9UBY9	170 aa		7.92	□□□□□ -1.14
TPM2-208	ENST00000607559	SHPK	Q9UHJ6	478 aa		7.92	□□□□□ -1.14
TPM2-208	ENST00000607559	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
TPM2-208	ENST00000607559	SELENOK	Q9Y6D0	94 aa		7.92	□□□□□ -1.14
TPM2-208	ENST00000607559		U3KQE9	123 aa		7.92	□□□□□ -1.14
TPM2-208	ENST00000607559		V9GYH0	126 aa		7.92	□□□□□ -1.14
TPM2-208	ENST00000607559	IGHV3OR16-8	A0A075B7F1	116 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	ZNF207	O43670	478 aa	Known RBP	7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	DFFB	O76075	338 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	YIF1A	O95070	293 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	CCR6	P51684	374 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	YPEL3	P61236	119 aa	Predicted RBP	7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	TMEM128	Q5BJH2	165 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	SPINK9	Q5DT21	86 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	PRSS54	Q6PEW0	395 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	CCDC190	Q86UF4	302 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	LRTM2	Q8N967	370 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	ENY2	Q9NPA8	101 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	CACNG5	Q9UF02	275 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559		U3KQ87	197 aa		7.91	□□□□□ -1.14
TPM2-208	ENST00000607559	DUXB	A0A1W2PPF3	345 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	RPS10-NUDT3	A0A1W2PQS6	291 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559		A0A1W2PS18	150 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	SPRY2	O43597	315 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	NOL3	O60936	208 aa	Known RBP	7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	PITX3	O75364	302 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	APOH	P02749	345 aa	Predicted RBP	7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	IGLC1	P0CG04	106 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	SULT1A3	P0DMM9	295 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	SULT1A4	P0DMN0	295 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	SLC25A6	P12236	298 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	NPPC	P23582	126 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	HOXA1	P49639	335 aa	Predicted RBP	7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	AP3S2	P59780	193 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	PAFAH1B2	P68402	229 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	SRPX	P78539	464 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	ZNF79	Q15937	498 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	TCF24	Q7RTU0	167 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	STPG3	Q8N7X2	389 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	ST8SIA2	Q92186	375 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	SLC25A21	Q9BQT8	299 aa	Predicted RBP	7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	TMEM231	Q9H6L2	316 aa		7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	HEYL	Q9NQ87	328 aa	Predicted RBP	7.9	□□□□□ -1.14
TPM2-208	ENST00000607559	SCGB2A1	O75556	95 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	FAU	P35544	74 aa	Known RBP	7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	OPRK1	P41145	380 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	ETFRF1	Q6IPR1	90 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	LYZL2	Q7Z4W2	148 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	LGI3	Q8N145	548 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	SLC24A4	Q8NFF2	622 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	OR1S2	Q8NGQ3	325 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	RNASE11	Q8TAA1	199 aa	Known RBP	7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	GRAMD2B	Q96HH9	432 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	CSTL1	Q9H114	145 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	MS4A6A	Q9H2W1	248 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	SEPSECS	Q9HD40	501 aa	Known RBP	7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	UBQLN2	Q9UHD9	624 aa		7.89	□□□□□ -1.15
TPM2-208	ENST00000607559	NXPH3	O95157	252 aa		7.88	□□□□□ -1.15
TPM2-208	ENST00000607559	ANXA3	P12429	323 aa		7.88	□□□□□ -1.15
TPM2-208	ENST00000607559	GPX4	P36969	197 aa	Predicted RBP	7.88	□□□□□ -1.15
TPM2-208	ENST00000607559	SMCO1	Q147U7	214 aa		7.88	□□□□□ -1.15
TPM2-208	ENST00000607559	GATAD1	Q8WUU5	269 aa		7.88	□□□□□ -1.15
TPM2-208	ENST00000607559	HYDIN	Q4G0P3	5121 aa		7.88	□□□□□ -1.15
TPM2-208	ENST00000607559	IGHV3-49	A0A0A0MS15	119 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	CEBPZOS	A8MTT3	80 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	FAM90A26	D6RGX4	464 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559		K7EQG2	157 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	AKR1C4	P17516	323 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	NPY1R	P25929	384 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	S100A5	P33763	92 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	APRG1	Q8IVJ8	170 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	TOMM5	Q8N4H5	51 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	DCANP1	Q8TF63	244 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559		Q8WTZ3	238 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	METTL26	Q96S19	204 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	MCUB	Q9NWR8	336 aa		7.87	□□□□□ -1.15
TPM2-208	ENST00000607559	IGHV3OR16-13	A0A075B7E8	117 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	IGHV3-74	A0A0B4J1X5	117 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	MPTX1	A8MV57	137 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	TOMM40	O96008	361 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	OR10J1	P30954	320 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	RND2	P52198	227 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	AP2S1	P53680	142 aa	Predicted RBP	7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	UBE2M	P61081	183 aa	Known RBP	7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	TIGIT	Q495A1	244 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	PYDC2	Q56P42	97 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	C16orf54	Q6UWD8	224 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	LYG2	Q86SG7	212 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	DTD1	Q8TEA8	209 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	GLMP	Q8WWB7	406 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	RBKS	Q9H477	322 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	TMED3	Q9Y3Q3	217 aa		7.86	□□□□□ -1.15
TPM2-208	ENST00000607559	HELT	A6NFD8	242 aa		7.85	□□□□□ -1.15
TPM2-208	ENST00000607559	DNASE2	O00115	360 aa	Predicted RBP	7.85	□□□□□ -1.15
TPM2-208	ENST00000607559	BUB3	O43684	328 aa		7.85	□□□□□ -1.15
TPM2-208	ENST00000607559	GIG44	P09565	113 aa	Predicted RBP	7.85	□□□□□ -1.15
TPM2-208	ENST00000607559	RD3L	P0DJH9	198 aa		7.85	□□□□□ -1.15
TPM2-208	ENST00000607559	P2RY1	P47900	373 aa		7.85	□□□□□ -1.15
TPM2-208	ENST00000607559	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.85	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms