RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 IL34Q6ZMJ4 242 aa12.02□□□□□ -0.49
CDCA3-211ENST00000603043 DPF1Q92782 380 aa12.02□□□□□ -0.49
CDCA3-211ENST00000603043 TNFSF18Q9UNG2 199 aa12.02□□□□□ -0.49
CDCA3-211ENST00000603043 IGHV4OR15-8A0A075B7B6 117 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 A0A087WW49 117 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 NDUFS6O75380 124 aaKnown RBP12.01□□□□□ -0.49
CDCA3-211ENST00000603043 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
CDCA3-211ENST00000603043 ZFP82Q8N141 532 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 LINC00482Q8N8I6 264 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 HEYLQ9NQ87 328 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-211ENST00000603043 LINC01619G3V211 115 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 OR8U8P0C7N1 319 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDCA3-211ENST00000603043 ACOT7LQ6ZUV0 252 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 MISP3Q96FF7 219 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 ZNF471Q9BX82 626 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-211ENST00000603043 HIPK2Q9H2X6 1198 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 SMCO4Q9NRQ5 59 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 PEF1Q9UBV8 284 aaKnown RBP12.01□□□□□ -0.49
CDCA3-211ENST00000603043 S4R3C0 116 aa12.01□□□□□ -0.49
CDCA3-211ENST00000603043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12□□□□□ -0.49
CDCA3-211ENST00000603043 COLCA2A8K830 154 aa12□□□□□ -0.49
CDCA3-211ENST00000603043 FAM90A26D6RGX4 464 aa12□□□□□ -0.49
CDCA3-211ENST00000603043 IGHV3-23P01764 117 aa12□□□□□ -0.49
CDCA3-211ENST00000603043 CD33P20138 364 aa12□□□□□ -0.49
CDCA3-211ENST00000603043 NPBWR1P48145 328 aa12□□□□□ -0.49
CDCA3-211ENST00000603043 DTD1Q8TEA8 209 aa12□□□□□ -0.49
CDCA3-211ENST00000603043 RBKSQ9H477 322 aa12□□□□□ -0.49
CDCA3-211ENST00000603043 TRBV12-3P01733 135 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 RNASE2P10153 161 aaKnown RBP11.99□□□□□ -0.49
CDCA3-211ENST00000603043 BSXQ3C1V8 233 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 C11orf87Q6NUJ2 197 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 VN1R17PQ8TDU5 208 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 CCDC140Q96MF4 163 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 TRBV7-1A0A0A6YYK4 115 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 RNF222A6NCQ9 220 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 CCSO14618 274 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 IAH1Q2TAA2 248 aaPredicted RBP11.99□□□□□ -0.49
CDCA3-211ENST00000603043 SLC24A4Q8NFF2 622 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 STOML3Q8TAV4 291 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 PINX1Q96BK5 328 aaKnown RBP11.99□□□□□ -0.49
CDCA3-211ENST00000603043 OR10C1Q96KK4 312 aa11.99□□□□□ -0.49
CDCA3-211ENST00000603043 K7EIM0 57 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 MED6O75586 246 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 HOXD3P31249 432 aaPredicted RBP11.98□□□□□ -0.49
CDCA3-211ENST00000603043 SLURP1P55000 103 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 CLEC19AQ6UXS0 136 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 WFDC9Q8NEX5 89 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 ZNF502Q8TBZ5 544 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 TMPRSS5Q9H3S3 457 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 TREM1Q9NP99 234 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 UQCC1Q9NVA1 299 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 NBEAL1Q6ZS30 2694 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 IGHV3-21A0A0B4J1V1 117 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 CORTO00230 105 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 ZNF124Q15973 351 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 OR4D5Q8NGN0 318 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 RNF141Q8WVD5 230 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 MAGT1Q9H0U3 335 aa11.98□□□□□ -0.49
CDCA3-211ENST00000603043 PPP5D1E7EU14 171 aa11.97□□□□□ -0.49
CDCA3-211ENST00000603043 I3L2K1 104 aa11.97□□□□□ -0.49
CDCA3-211ENST00000603043 BMPR1BO00238 502 aa11.97□□□□□ -0.49
CDCA3-211ENST00000603043 NKX2-1P43699 371 aaPredicted RBP11.97□□□□□ -0.49
CDCA3-211ENST00000603043 RPEL1Q2QD12 228 aa11.97□□□□□ -0.49
CDCA3-211ENST00000603043 C2orf83Q53S99 150 aa11.97□□□□□ -0.49
CDCA3-211ENST00000603043 PVRIGQ6DKI7 326 aa11.97□□□□□ -0.49
CDCA3-211ENST00000603043 C21orf62Q9NYP8 219 aa11.97□□□□□ -0.49
CDCA3-211ENST00000603043 GSKIPQ9P0R6 139 aa11.97□□□□□ -0.49
CDCA3-211ENST00000603043 C5orf51A6NDU8 294 aa11.96□□□□□ -0.49
CDCA3-211ENST00000603043 SYNGR2O43760 224 aa11.96□□□□□ -0.49
CDCA3-211ENST00000603043 MT-CO2P00403 227 aa11.96□□□□□ -0.49
CDCA3-211ENST00000603043 IFNA10P01566 189 aa11.96□□□□□ -0.49
CDCA3-211ENST00000603043 CLEC3BP05452 202 aa11.96□□□□□ -0.49
CDCA3-211ENST00000603043 TPT1P13693 172 aaKnown RBP11.96□□□□□ -0.49
CDCA3-211ENST00000603043 NPY1RP25929 384 aa11.96□□□□□ -0.49
CDCA3-211ENST00000603043 DEFA6Q01524 100 aa11.96□□□□□ -0.49
CDCA3-211ENST00000603043 ID3Q02535 119 aa11.96□□□□□ -0.49
CDCA3-211ENST00000603043 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.49
CDCA3-211ENST00000603043 MT-ND4LP03901 98 aa11.96□□□□□ -0.5
CDCA3-211ENST00000603043 IAPPP10997 89 aa11.96□□□□□ -0.5
CDCA3-211ENST00000603043 GPR183P32249 361 aa11.96□□□□□ -0.5
CDCA3-211ENST00000603043 ARL3P36405 182 aa11.96□□□□□ -0.5
CDCA3-211ENST00000603043 FABP9Q0Z7S8 132 aa11.96□□□□□ -0.5
CDCA3-211ENST00000603043 UBAC2Q8NBM4 344 aa11.96□□□□□ -0.5
CDCA3-211ENST00000603043 DCUN1D4Q92564 292 aa11.96□□□□□ -0.5
CDCA3-211ENST00000603043 RCC1LQ96I51 464 aaKnown RBP11.96□□□□□ -0.5
CDCA3-211ENST00000603043 CIB3Q96Q77 187 aaPredicted RBP11.96□□□□□ -0.5
CDCA3-211ENST00000603043 PFDN5Q99471 154 aa11.96□□□□□ -0.5
CDCA3-211ENST00000603043 CMYA5Q8N3K9 4069 aa11.95□□□□□ -0.5
CDCA3-211ENST00000603043 SCGB1D2O95969 90 aa11.95□□□□□ -0.5
CDCA3-211ENST00000603043 OPRK1P41145 380 aa11.95□□□□□ -0.5
CDCA3-211ENST00000603043 RAB2AP61019 212 aa11.95□□□□□ -0.5
CDCA3-211ENST00000603043 AKR1C1Q04828 323 aa11.95□□□□□ -0.5
CDCA3-211ENST00000603043 TMEM170AQ8WVE7 144 aa11.95□□□□□ -0.5
CDCA3-211ENST00000603043 NOTCH1P46531 2555 aa11.95□□□□□ -0.5
CDCA3-211ENST00000603043 OR2T8A6NH00 312 aa11.94□□□□□ -0.5
CDCA3-211ENST00000603043 GGCTO75223 188 aaKnown RBP11.94□□□□□ -0.5
CDCA3-211ENST00000603043 IGHV3-48P01763 117 aa11.94□□□□□ -0.5
CDCA3-211ENST00000603043 IGLL1P15814 213 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms