RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ZNF546Q86UE3 836 aa9.71□□□□□ -0.86
CHMP2A-206ENST00000600118 TMEM217Q8N7C4 229 aa9.71□□□□□ -0.86
CHMP2A-206ENST00000600118 THAP8Q8NA92 274 aa9.71□□□□□ -0.86
CHMP2A-206ENST00000600118 UBAC2Q8NBM4 344 aa9.71□□□□□ -0.86
CHMP2A-206ENST00000600118 NEURL2Q9BR09 285 aa9.71□□□□□ -0.86
CHMP2A-206ENST00000600118 HSPB11Q9Y547 144 aa9.71□□□□□ -0.86
CHMP2A-206ENST00000600118 IGKV1OR2-108A0A075B7D4 117 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 TRAV30A0A087WSZ9 112 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 RNF222A6NCQ9 220 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 M0QZ24 198 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 NUPL2O15504 423 aaKnown RBP9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 OR2C1O95371 312 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 TSPAN15O95858 294 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 ZP3P21754 424 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 CD300CQ08708 224 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 ATP6V1FQ16864 119 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 GPHB5Q86YW7 130 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 OR1S2Q8NGQ3 325 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 OR5C1Q8NGR4 320 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 DPF1Q92782 380 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 ZC4H2Q9NQZ6 224 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 LSM4Q9Y4Z0 139 aaKnown RBP9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 DNHD1Q96M86 4753 aa9.7□□□□□ -0.86
CHMP2A-206ENST00000600118 HMSDA8MTL9 139 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 OR10J1P30954 320 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 SLURP1P55000 103 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 KLF5Q13887 457 aaPredicted RBP9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 TIGITQ495A1 244 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 TREML4Q6UXN2 200 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 LINC00482Q8N8I6 264 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 TRGV9Q99603 122 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 TMEM147Q9BVK8 224 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 NPVFQ9HCQ7 196 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 UQCC1Q9NVA1 299 aa9.69□□□□□ -0.86
CHMP2A-206ENST00000600118 ARPC5O15511 151 aa9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 C1QBP02746 253 aa9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 YPEL3P61236 119 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 AKR1C1Q04828 323 aa9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 RELQ04864 619 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 RPEL1Q2QD12 228 aa9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 ZNF600Q6ZNG1 722 aa9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 REC114Q7Z4M0 266 aa9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 LILRB2Q8N423 598 aa9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 INO80EQ8NBZ0 244 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 DLX4Q92988 240 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 WDR83OSQ9Y284 106 aa9.68□□□□□ -0.86
CHMP2A-206ENST00000600118 SMCO3A2RU48 225 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 ZFP92A6NM28 416 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 LGALS9O00182 355 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 NDUFA4O00483 81 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 SCGB2A1O75556 95 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 PF4P02776 101 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 NUP62P37198 522 aaPredicted RBP9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 ZNF90Q03938 601 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 CLINT1Q14677 625 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 UNQ9165/PRO28630Q6UXU0 137 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 C1QL4Q86Z23 238 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 WFDC9Q8NEX5 89 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 TMEM190Q8WZ59 177 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 ATP5SQ99766 215 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 WFDC1Q9HC57 220 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 FBXL17Q9UF56 701 aa9.67□□□□□ -0.86
CHMP2A-206ENST00000600118 IGHV3-35A0A0C4DH35 117 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 UBE2L5PA0A1B0GUS4 154 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 TOMM40O96008 361 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 SYNJ2BPP57105 145 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 OR2F1Q13607 317 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 ZNF345Q14585 488 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 TEPPQ6URK8 271 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 TOMM20LQ6UXN7 152 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 MGST2Q99735 147 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 SMIM3Q9BZL3 60 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 MFFQ9GZY8 342 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 ZFAND3Q9H8U3 227 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 WNK1Q9H4A3 2382 aa9.66□□□□□ -0.86
CHMP2A-206ENST00000600118 VWFP04275 2813 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 A8MWP6 167 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 DFFBO76075 338 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 RD3LP0DJH9 198 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 PSG1P11464 419 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 CXCL2P19875 107 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 FAM106AQ4KMX7 169 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 PRR31Q5SQ13 230 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 BTNL8Q6UX41 500 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 TMEM182Q6ZP80 229 aaPredicted RBP9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 CYP2G1PQ6ZSU1 146 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 KCNRGQ8N5I3 272 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 Q8WTZ3 238 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 RCC1LQ96I51 464 aaKnown RBP9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 PARD6GQ9BYG4 376 aaPredicted RBP9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 WDR61Q9GZS3 305 aaKnown RBP9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 SLC45A2Q9UMX9 530 aa9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 PUS1Q9Y606 427 aaKnown RBP eCLIP9.65□□□□□ -0.86
CHMP2A-206ENST00000600118 TRRAPQ9Y4A5 3859 aa9.65□□□□□ -0.87
CHMP2A-206ENST00000600118 WI2-2373I1.2A0A1W2PRP0 233 aa9.64□□□□□ -0.87
CHMP2A-206ENST00000600118 TMEM213A2RRL7 107 aa9.64□□□□□ -0.87
CHMP2A-206ENST00000600118 K7EMT4 169 aa9.64□□□□□ -0.87
CHMP2A-206ENST00000600118 OVOL1O14753 267 aa9.64□□□□□ -0.87
CHMP2A-206ENST00000600118 AGPAT2O15120 278 aa9.64□□□□□ -0.87
CHMP2A-206ENST00000600118 MPDU1O75352 247 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms