RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 HSD17B11Q8NBQ5 300 aa10.53□□□□□ -0.72
IRF3-225ENST00000600022 TMED6Q8WW62 240 aa10.53□□□□□ -0.72
IRF3-225ENST00000600022 GINS3Q9BRX5 216 aa10.53□□□□□ -0.72
IRF3-225ENST00000600022 GGACTQ9BVM4 153 aa10.53□□□□□ -0.72
IRF3-225ENST00000600022 NDUFA4L2Q9NRX3 87 aa10.53□□□□□ -0.72
IRF3-225ENST00000600022 UQCC1Q9NVA1 299 aa10.53□□□□□ -0.72
IRF3-225ENST00000600022 HYDINQ4G0P3 5121 aa10.52□□□□□ -0.72
IRF3-225ENST00000600022 IGHV4OR15-8A0A075B7B6 117 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 A0A087WW49 117 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 TRAV41A0A0B4J266 112 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 INS-IGF2F8WCM5 200 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 FCN1O00602 326 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 OVOL1O14753 267 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 SAP30O75446 220 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 EGR2P11161 476 aaPredicted RBP10.52□□□□□ -0.73
IRF3-225ENST00000600022 RAB5CP51148 216 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 C5orf64Q2M2E5 130 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 ZNF709Q8N972 641 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 BSCL2Q96G97 398 aaPredicted RBP10.52□□□□□ -0.73
IRF3-225ENST00000600022 SRSF8Q9BRL6 282 aaKnown RBP10.52□□□□□ -0.73
IRF3-225ENST00000600022 ARV1Q9H2C2 271 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 FBXL15Q9H469 300 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 PFDN2Q9UHV9 154 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 ZNF580Q9UK33 172 aa10.52□□□□□ -0.73
IRF3-225ENST00000600022 LCE6AA0A183 80 aa10.51□□□□□ -0.73
IRF3-225ENST00000600022 C15orf62A8K5M9 175 aa10.51□□□□□ -0.73
IRF3-225ENST00000600022 PRH1P02810 166 aa10.51□□□□□ -0.73
IRF3-225ENST00000600022 GP9P14770 177 aa10.51□□□□□ -0.73
IRF3-225ENST00000600022 INSL3P51460 131 aa10.51□□□□□ -0.73
IRF3-225ENST00000600022 C19orf54Q5BKX5 351 aa10.51□□□□□ -0.73
IRF3-225ENST00000600022 ARPC1AQ92747 370 aa10.51□□□□□ -0.73
IRF3-225ENST00000600022 PARD6GQ9BYG4 376 aaPredicted RBP10.51□□□□□ -0.73
IRF3-225ENST00000600022 WFDC1Q9HC57 220 aa10.51□□□□□ -0.73
IRF3-225ENST00000600022 UBE2L5PA0A1B0GUS4 154 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 SMCO3A2RU48 225 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 UMAD1C9J7I0 102 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 C17orf112F2Z3M2 114 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 CYB5BO43169 146 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 CA2P00918 260 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 IGHV3-11P01762 117 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 HLA-DRB1P01911 266 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 SPP1P10451 314 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 BLOC1S1P78537 153 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 DLK1P80370 383 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 SSBP2P81877 361 aaPredicted RBP10.5□□□□□ -0.73
IRF3-225ENST00000600022 RAB31Q13636 194 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 C2orf83Q53S99 150 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 Q8N1Y9 231 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 OR2G3Q8NGZ4 309 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 ABHD5Q8WTS1 349 aa10.5□□□□□ -0.73
IRF3-225ENST00000600022 ZNF705EA8MWA4 302 aaPredicted RBP10.49□□□□□ -0.73
IRF3-225ENST00000600022 MPDU1O75352 247 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 OR13C7P0DN81 318 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 MYOD1P15172 320 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 ATP6V0CP27449 155 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 SULT1A2P50226 295 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 PJVKQ0ZLH3 352 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 ECSCRQ19T08 205 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 FAM74A1Q5RGS3 127 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 C10orf55Q5SWW7 151 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 AKR1C8PQ5T2L2 129 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 ACSM6Q6P461 480 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 ADAMTSL5Q6ZMM2 481 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 SAT2Q96F10 170 aaPredicted RBP10.49□□□□□ -0.73
IRF3-225ENST00000600022 MS4A10Q96PG2 267 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 FAM103A1Q9BTL3 118 aaKnown RBP10.49□□□□□ -0.73
IRF3-225ENST00000600022 KCNIP2Q9NS61 270 aa10.49□□□□□ -0.73
IRF3-225ENST00000600022 A0A1B0GW64 132 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 CGB1A6NKQ9 187 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 FNDC10F2Z333 226 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 LINC01619G3V211 115 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 CORTO00230 105 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 FGF7P21781 194 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 CAMLGP49069 296 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 CX3CL1P78423 397 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 ARL16Q0P5N6 197 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 ETFRF1Q6IPR1 90 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 OR10W1Q8NGF6 305 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 OR1L6Q8NGR2 347 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 RNASEH2CQ8TDP1 164 aaKnown RBP10.48□□□□□ -0.73
IRF3-225ENST00000600022 SRSF12Q8WXF0 261 aaKnown RBP10.48□□□□□ -0.73
IRF3-225ENST00000600022 CITED4Q96RK1 184 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
IRF3-225ENST00000600022 WDR61Q9GZS3 305 aaKnown RBP10.48□□□□□ -0.73
IRF3-225ENST00000600022 TIMM9Q9Y5J7 89 aa10.48□□□□□ -0.73
IRF3-225ENST00000600022 RPS10-NUDT3A0A1W2PQS6 291 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 LINC00862A6NCI5 91 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 PMS2P5A8MQ11 134 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 TEX46H3BTG2 121 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 MBP02144 154 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 NMBP08949 121 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 RNASE2P10153 161 aaKnown RBP10.47□□□□□ -0.73
IRF3-225ENST00000600022 RAB2AP61019 212 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 SERF2P84101 59 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 AKR1C1Q04828 323 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 FXYD3Q14802 87 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 VWC2Q2TAL6 325 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 DPPA3Q6W0C5 159 aa10.47□□□□□ -0.73
IRF3-225ENST00000600022 TMEM182Q6ZP80 229 aaPredicted RBP10.47□□□□□ -0.73
IRF3-225ENST00000600022 SLC35E1Q96K37 410 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms