RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 NOXA1Q86UR1 476 aa10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 Q8N1Y9 231 aa10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 LILRB2Q8N423 598 aa10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 CIB3Q96Q77 187 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 GPN1Q9HCN4 374 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 PSENENQ9NZ42 101 aa10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 PAIP2BQ9ULR5 123 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 PUS1Q9Y606 427 aaKnown RBP eCLIP10.71□□□□□ -0.69
SHKBP1-217ENST00000598558 C7orf66A4D0T2 115 aa10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 K7EPK0 472 aa10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 GPX4P36969 197 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 RELQ04864 619 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 ARL16Q0P5N6 197 aa10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 BTNL8Q6UX41 500 aa10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 ZNF600Q6ZNG1 722 aa10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 PALMDQ9NP74 551 aa10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 MRPL27Q9P0M9 148 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 SMPXQ9UHP9 88 aa10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 STRAPQ9Y3F4 350 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-217ENST00000598558 IGKV1OR2-108A0A075B7D4 117 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 IGHV3OR16-13A0A075B7E8 117 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 IGHV3-74A0A0B4J1X5 117 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 GOSR2O14653 212 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 OR10J1P30954 320 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 RAB11AP62491 216 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 RAB32Q13637 225 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 DEFB121Q5J5C9 76 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 ETFRF1Q6IPR1 90 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 TMEM14EPQ6UXP3 125 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 GSG1LQ6UXU4 331 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 TMEM61Q8N0U2 210 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 DAZ1Q9NQZ3 744 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 LSM5Q9Y4Y9 91 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-217ENST00000598558 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 CHEK1O14757 476 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 SCAF4O95104 1147 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 PTTG1O95997 202 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 METTL15P1P0C7V9 234 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 H2BFSP57053 126 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 ZNF90Q03938 601 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 OR1S2Q8NGQ3 325 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 MARC2Q969Z3 335 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 RAB40CQ96S21 281 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 TECRQ9NZ01 308 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 ZMAT5Q9UDW3 170 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 ALG5Q9Y673 324 aa10.68□□□□□ -0.7
SHKBP1-217ENST00000598558 TRAV30A0A087WSZ9 112 aa10.67□□□□□ -0.7
SHKBP1-217ENST00000598558 TAS2R30P59541 319 aa10.67□□□□□ -0.7
SHKBP1-217ENST00000598558 YPEL3P61236 119 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-217ENST00000598558 OR8G2PQ6IF36 304 aa10.67□□□□□ -0.7
SHKBP1-217ENST00000598558 TMEM182Q6ZP80 229 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-217ENST00000598558 OR2K2Q8NGT1 345 aa10.67□□□□□ -0.7
SHKBP1-217ENST00000598558 RNF2Q99496 336 aa10.67□□□□□ -0.7
SHKBP1-217ENST00000598558 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
SHKBP1-217ENST00000598558 TRAV14DV4A0A0A6YYC5 116 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 IGHV3-66A0A0C4DH42 116 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 FAM24AA6NFZ4 105 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 H0YIZ8 118 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 TSC22D2O75157 780 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 CD7P09564 240 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 PSG1P11464 419 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 RPP30P78346 268 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 LCN12Q6JVE5 192 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 ACOT7LQ6ZUV0 252 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 THAP8Q8NA92 274 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 ST8SIA2Q92186 375 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 SLC35E1Q96K37 410 aa10.66□□□□□ -0.7
SHKBP1-217ENST00000598558 TOMM40O96008 361 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 RD3LP0DJH9 198 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 CRYBB3P26998 211 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 S100A10P60903 97 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 RRAS2P62070 204 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 DCTN2Q13561 401 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 USF2Q15853 346 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 GUCA2BQ16661 112 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 STPG3Q8N7X2 389 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 Q8WTZ3 238 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 U3KQE9 123 aa10.65□□□□□ -0.7
SHKBP1-217ENST00000598558 IGSF23A1L1A6 192 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 ZFP92A6NM28 416 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 SSNA1O43805 119 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 CXCL3P19876 107 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 GATA2P23769 480 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 OR2F1Q13607 317 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 RNF126Q9BV68 326 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 OR5AC2Q9NZP5 309 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 MGAT4CQ9UBM8 478 aa10.64□□□□□ -0.71
SHKBP1-217ENST00000598558 L7N2F9 121 aa10.63□□□□□ -0.71
SHKBP1-217ENST00000598558 DFFBO76075 338 aa10.63□□□□□ -0.71
SHKBP1-217ENST00000598558 IL4P05112 153 aa10.63□□□□□ -0.71
SHKBP1-217ENST00000598558 NPPCP23582 126 aa10.63□□□□□ -0.71
SHKBP1-217ENST00000598558 VAMP2P63027 116 aa10.63□□□□□ -0.71
SHKBP1-217ENST00000598558 OXA1LQ15070 435 aa10.63□□□□□ -0.71
SHKBP1-217ENST00000598558 OR51G1Q8NGK1 321 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms