RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 INS-IGF2F8WCM5 200 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 SSNA1O43805 119 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 GNG7O60262 68 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 B3GALNT1O75752 331 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 YIF1AO95070 293 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 CDS2O95674 445 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 TMEM50AO95807 157 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 IFNA17P01571 189 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 SULT1A3P0DMM9 295 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 SULT1A4P0DMN0 295 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
VRK3-214ENST00000598553 ERHP84090 104 aaKnown RBP7.86□□□□□ -1.15
VRK3-214ENST00000598553 BSXQ3C1V8 233 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 LAMTOR1Q6IAA8 161 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 GSG1LQ6UXU4 331 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 TMEM116Q8NCL8 245 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 TMEM222Q9H0R3 208 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 MAP6D1Q9H9H5 199 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 CACNG5Q9UF02 275 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 SCP2D1Q9UJQ7 156 aa7.86□□□□□ -1.15
VRK3-214ENST00000598553 CRYM-AS1A6NIL9 109 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 CCR6P51684 374 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 SUPT4H1P63272 117 aaKnown RBP7.85□□□□□ -1.15
VRK3-214ENST00000598553 TNFRSF9Q07011 255 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 TIGITQ495A1 244 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 AARDQ4LEZ3 155 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 TMEM268Q5VZI3 342 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 TCF24Q7RTU0 167 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 WFDC3Q8IUB2 231 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 SLC7A5P1Q8MH63 180 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 IL17DQ8TAD2 202 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 ZNF431Q8TF32 576 aaPredicted RBP7.85□□□□□ -1.15
VRK3-214ENST00000598553 ASB13Q8WXK3 278 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 PDCD10Q9BUL8 212 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 VSIRQ9H7M9 311 aa7.85□□□□□ -1.15
VRK3-214ENST00000598553 PUS1Q9Y606 427 aaKnown RBP eCLIP7.85□□□□□ -1.15
VRK3-214ENST00000598553 TEX13DA0A0J9YY54 714 aaPredicted RBP7.84□□□□□ -1.15
VRK3-214ENST00000598553 CORTO00230 105 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 DFFBO76075 338 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 NDUFB6O95139 128 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 IGKV1-17P01599 117 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 AKAIN1P0CW23 69 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 SNCAP37840 140 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 APOC4P55056 127 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 PMS2P11Q13670 270 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 TMEM187Q14656 261 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 RBMS2Q15434 407 aaKnown RBP7.84□□□□□ -1.15
VRK3-214ENST00000598553 SURF2Q15527 256 aaPredicted RBP7.84□□□□□ -1.15
VRK3-214ENST00000598553 LEMD1Q68G75 181 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 LYG2Q86SG7 212 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 OR11H7Q8NGC8 314 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 RNASE11Q8TAA1 199 aaKnown RBP7.84□□□□□ -1.15
VRK3-214ENST00000598553 RRNAD1Q96FB5 475 aaKnown RBP7.84□□□□□ -1.15
VRK3-214ENST00000598553 C14orf166Q9Y224 244 aaKnown RBP7.84□□□□□ -1.15
VRK3-214ENST00000598553 HSPB11Q9Y547 144 aa7.84□□□□□ -1.15
VRK3-214ENST00000598553 TRAV14DV4A0A0A6YYC5 116 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 DISC1C4P0D8 188 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 SPRY2O43597 315 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 OPRK1P41145 380 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 NPBWR1P48145 328 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 ZNF600Q6ZNG1 722 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 FAM219AQ8IW50 185 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 C9orf62Q8N4C0 152 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 RBPMSQ93062 196 aaKnown RBP7.83□□□□□ -1.16
VRK3-214ENST00000598553 GINS3Q9BRX5 216 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 ENY2Q9NPA8 101 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 TP53TG1Q9Y2A0 90 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
VRK3-214ENST00000598553 KIR2DL5BA0A0G2JN68 375 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 KIR2DL5BA0A0G2JPC4 375 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 UBE2CO00762 179 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 CLN5O75503 358 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 GIPP09681 153 aaPredicted RBP7.82□□□□□ -1.16
VRK3-214ENST00000598553 IGLC1P0CG04 106 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 SUB1P53999 127 aaKnown RBP eCLIP7.82□□□□□ -1.16
VRK3-214ENST00000598553 SPCS3P61009 180 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 RAP2BP61225 183 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 NMSQ5H8A3 153 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 PRSS54Q6PEW0 395 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 Q6ZWC4 215 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 LYZL2Q7Z4W2 148 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 KIR2DL5AQ8N109 375 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 OR4X1Q8NH49 305 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 KIR2DL5BQ8NHK3 375 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 RNF183Q96D59 192 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 PRRT1Q99946 306 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 MS4A6AQ9H2W1 248 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 TMEM56-RWDD3S4R434 201 aa7.82□□□□□ -1.16
VRK3-214ENST00000598553 PLECQ15149 4684 aaKnown RBP7.82□□□□□ -1.16
VRK3-214ENST00000598553 CD5P06127 495 aa7.81□□□□□ -1.16
VRK3-214ENST00000598553 GIG44P09565 113 aaPredicted RBP7.81□□□□□ -1.16
VRK3-214ENST00000598553 BMI1P35226 326 aa7.81□□□□□ -1.16
VRK3-214ENST00000598553 RND2P52198 227 aa7.81□□□□□ -1.16
VRK3-214ENST00000598553 DEFB131AP59861 70 aa7.81□□□□□ -1.16
VRK3-214ENST00000598553 DHODHQ02127 395 aa7.81□□□□□ -1.16
VRK3-214ENST00000598553 USF2Q15853 346 aaPredicted RBP7.81□□□□□ -1.16
VRK3-214ENST00000598553 Q5BKY6 102 aa7.81□□□□□ -1.16
VRK3-214ENST00000598553 SLC24A4Q8NFF2 622 aa7.81□□□□□ -1.16
VRK3-214ENST00000598553 OR52E5Q8NH55 327 aa7.81□□□□□ -1.16
VRK3-214ENST00000598553 GALNT14Q96FL9 552 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms