RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 IGHV3-49A0A0A0MS15 119 aa15.75■□□□□ 0.11
PNKP-209ENST00000596726 RBMY1BA6NDE4 496 aaKnown RBP15.75■□□□□ 0.11
PNKP-209ENST00000596726 RBMY1EA6NEQ0 496 aaKnown RBP15.75■□□□□ 0.11
PNKP-209ENST00000596726 MED6O75586 246 aa15.75■□□□□ 0.11
PNKP-209ENST00000596726 TCRBP04435 133 aa15.75■□□□□ 0.11
PNKP-209ENST00000596726 RBMY1DP0C7P1 496 aaKnown RBP15.75■□□□□ 0.11
PNKP-209ENST00000596726 C4orf46Q504U0 113 aa15.75■□□□□ 0.11
PNKP-209ENST00000596726 FAM90A2PQ658T7 463 aa15.75■□□□□ 0.11
PNKP-209ENST00000596726 OR1S2Q8NGQ3 325 aa15.75■□□□□ 0.11
PNKP-209ENST00000596726 VSIRQ9H7M9 311 aa15.75■□□□□ 0.11
PNKP-209ENST00000596726 ZMAT4Q9H898 229 aa15.75■□□□□ 0.11
PNKP-209ENST00000596726 MPTX1A8MV57 137 aa15.74■□□□□ 0.11
PNKP-209ENST00000596726 SYNGR2O43760 224 aa15.74■□□□□ 0.11
PNKP-209ENST00000596726 APOHP02749 345 aaPredicted RBP15.74■□□□□ 0.11
PNKP-209ENST00000596726 IAPPP10997 89 aa15.74■□□□□ 0.11
PNKP-209ENST00000596726 YPEL3P61236 119 aaPredicted RBP15.74■□□□□ 0.11
PNKP-209ENST00000596726 NPIPB3Q92617 1050 aa15.74■□□□□ 0.11
PNKP-209ENST00000596726 RCHY1Q96PM5 261 aa15.74■□□□□ 0.11
PNKP-209ENST00000596726 SRD5A3Q9H8P0 318 aa15.74■□□□□ 0.11
PNKP-209ENST00000596726 IFNA4P05014 189 aa15.73■□□□□ 0.11
PNKP-209ENST00000596726 OR10J1P30954 320 aa15.73■□□□□ 0.11
PNKP-209ENST00000596726 GPX4P36969 197 aaPredicted RBP15.73■□□□□ 0.11
PNKP-209ENST00000596726 ID3Q02535 119 aa15.73■□□□□ 0.11
PNKP-209ENST00000596726 MITD1Q8WV92 249 aa15.73■□□□□ 0.11
PNKP-209ENST00000596726 ST8SIA2Q92186 375 aa15.73■□□□□ 0.11
PNKP-209ENST00000596726 CIB3Q96Q77 187 aaPredicted RBP15.73■□□□□ 0.11
PNKP-209ENST00000596726 MAGT1Q9H0U3 335 aa15.73■□□□□ 0.11
PNKP-209ENST00000596726 TBC1D24Q9ULP9 559 aa15.73■□□□□ 0.11
PNKP-209ENST00000596726 IGHV3OR16-13A0A075B7E8 117 aa15.72■□□□□ 0.11
PNKP-209ENST00000596726 IGHV3-74A0A0B4J1X5 117 aa15.72■□□□□ 0.11
PNKP-209ENST00000596726 IFNA21P01568 189 aa15.72■□□□□ 0.11
PNKP-209ENST00000596726 LILRB2Q8N423 598 aa15.72■□□□□ 0.11
PNKP-209ENST00000596726 NBEAL2Q6ZNJ1 2754 aa15.71■□□□□ 0.11
PNKP-209ENST00000596726 NPPCP23582 126 aa15.71■□□□□ 0.11
PNKP-209ENST00000596726 CRYBB3P26998 211 aa15.71■□□□□ 0.11
PNKP-209ENST00000596726 BMI1P35226 326 aa15.71■□□□□ 0.11
PNKP-209ENST00000596726 OR4D5Q8NGN0 318 aa15.71■□□□□ 0.11
PNKP-209ENST00000596726 Q8WTZ3 238 aa15.71■□□□□ 0.11
PNKP-209ENST00000596726 ACY3Q96HD9 319 aa15.71■□□□□ 0.11
PNKP-209ENST00000596726 FAM110AQ9BQ89 295 aa15.71■□□□□ 0.11
PNKP-209ENST00000596726 TRAV6A0A075B6T7 132 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 OR4C46A6NHA9 309 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 WRBO00258 174 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 CD5P06127 495 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 RAB11AP62491 216 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 ASAH1Q13510 395 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 GAMTQ14353 236 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 ZNF846Q147U1 533 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 ODF3L2Q3SX64 289 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 TCF24Q7RTU0 167 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 CITED4Q96RK1 184 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 METTL26Q96S19 204 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 WDR12Q9GZL7 423 aaKnown RBP15.7■□□□□ 0.1
PNKP-209ENST00000596726 NUDT15Q9NV35 164 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 U3KQE9 123 aa15.7■□□□□ 0.1
PNKP-209ENST00000596726 TOMM40O96008 361 aa15.69■□□□□ 0.1
PNKP-209ENST00000596726 RPP30P78346 268 aaKnown RBP15.69■□□□□ 0.1
PNKP-209ENST00000596726 SPATA25Q9BR10 227 aa15.69■□□□□ 0.1
PNKP-209ENST00000596726 UBQLN2Q9UHD9 624 aa15.69■□□□□ 0.1
PNKP-209ENST00000596726 IGKV1D-37A0A075B6S9 117 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 IGHV3-66A0A0C4DH42 116 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 FAM240BA0A1B0GVZ2 78 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 A0A1W2PS18 150 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 PRSS46E5RG02 174 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 UPK1BO75841 260 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 NKX2-1P43699 371 aaPredicted RBP15.68■□□□□ 0.1
PNKP-209ENST00000596726 POLR2GP62487 172 aaKnown RBP eCLIP15.68■□□□□ 0.1
PNKP-209ENST00000596726 MZT2BQ6NZ67 158 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 SLC35E1Q96K37 410 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 TMEM231Q9H6L2 316 aa15.68■□□□□ 0.1
PNKP-209ENST00000596726 DFFBO76075 338 aa15.67■□□□□ 0.1
PNKP-209ENST00000596726 H2AFB2P0C5Z0 115 aa15.67■□□□□ 0.1
PNKP-209ENST00000596726 DNAH7Q8WXX0 4024 aa15.66■□□□□ 0.1
PNKP-209ENST00000596726 RD3LP0DJH9 198 aa15.66■□□□□ 0.1
PNKP-209ENST00000596726 PSG1P11464 419 aa15.66■□□□□ 0.1
PNKP-209ENST00000596726 IFITM3Q01628 133 aa15.66■□□□□ 0.1
PNKP-209ENST00000596726 USF2Q15853 346 aaPredicted RBP15.66■□□□□ 0.1
PNKP-209ENST00000596726 IAH1Q2TAA2 248 aaPredicted RBP15.66■□□□□ 0.1
PNKP-209ENST00000596726 SPANXN5Q5MJ07 72 aa15.66■□□□□ 0.1
PNKP-209ENST00000596726 ZBTB8BQ8NAP8 495 aaPredicted RBP15.66■□□□□ 0.1
PNKP-209ENST00000596726 ZNF431Q8TF32 576 aaPredicted RBP15.66■□□□□ 0.1
PNKP-209ENST00000596726 SEC22CQ9BRL7 303 aa15.66■□□□□ 0.1
PNKP-209ENST00000596726 PAIP2BQ9ULR5 123 aaKnown RBP15.66■□□□□ 0.1
PNKP-209ENST00000596726 IGKV3-7A0A075B6H7 116 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 LOC102724200A0A096LPH7 203 aaPredicted RBP15.65■□□□□ 0.1
PNKP-209ENST00000596726 TRAV2A0A0B4J234 112 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 IL4P05112 153 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 HNRNPCP07910 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
PNKP-209ENST00000596726 P2RY1P47900 373 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 TFPI2P48307 235 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 PAFAH1B2P68402 229 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 GBGT1Q8N5D6 347 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 SMIM8Q96KF7 97 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 GGTLC1Q9BX51 225 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 MS4A6AQ9H2W1 248 aa15.65■□□□□ 0.1
PNKP-209ENST00000596726 STRAPQ9Y3F4 350 aaKnown RBP15.65■□□□□ 0.1
PNKP-209ENST00000596726 H3BP45 60 aa15.64■□□□□ 0.09
PNKP-209ENST00000596726 PAX9P55771 341 aa15.64■□□□□ 0.09
PNKP-209ENST00000596726 CMC4P56277 68 aaPredicted RBP15.64■□□□□ 0.09
PNKP-209ENST00000596726 THAP8Q8NA92 274 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms