RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 IGKV1-17P01599 117 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 IGLC1P0CG04 106 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 EDN2P20800 178 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 OR10J1P30954 320 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 S100A10P60903 97 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 VAMP2P63027 116 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 TIGITQ495A1 244 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 OR1S2Q8NGQ3 325 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 ZNF414Q96IQ9 312 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 DAZ1Q9NQZ3 744 aaKnown RBP10.89□□□□□ -0.67
LIG1-208ENST00000595758 TECRQ9NZ01 308 aaKnown RBP10.89□□□□□ -0.67
LIG1-208ENST00000595758 MRPL27Q9P0M9 148 aaKnown RBP10.89□□□□□ -0.67
LIG1-208ENST00000595758 ZNF256Q9Y2P7 627 aaPredicted RBP10.89□□□□□ -0.67
LIG1-208ENST00000595758 ALG5Q9Y673 324 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 SORL1Q92673 2214 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 DNAH3Q8TD57 4116 aa10.88□□□□□ -0.67
LIG1-208ENST00000595758 ZNF207O43670 478 aaKnown RBP10.88□□□□□ -0.67
LIG1-208ENST00000595758 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
LIG1-208ENST00000595758 PVALBP20472 110 aaPredicted RBP10.88□□□□□ -0.67
LIG1-208ENST00000595758 CYCSP99999 105 aaKnown RBP10.88□□□□□ -0.67
LIG1-208ENST00000595758 GAMTQ14353 236 aa10.88□□□□□ -0.67
LIG1-208ENST00000595758 DEFB114Q30KQ6 69 aa10.88□□□□□ -0.67
LIG1-208ENST00000595758 TMEM14EPQ6UXP3 125 aa10.88□□□□□ -0.67
LIG1-208ENST00000595758 PUS1Q9Y606 427 aaKnown RBP eCLIP10.88□□□□□ -0.67
LIG1-208ENST00000595758 WI2-2373I1.2A0A1W2PRP0 233 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 PRSS46E5RG02 174 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 METTL15P1P0C7V9 234 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 YPEL3P61236 119 aaPredicted RBP10.87□□□□□ -0.67
LIG1-208ENST00000595758 RAB32Q13637 225 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 CD300EQ496F6 205 aaPredicted RBP10.87□□□□□ -0.67
LIG1-208ENST00000595758 OR8G2PQ6IF36 304 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 OR2K2Q8NGT1 345 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 Q8WTZ3 238 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 PRR25Q96S07 402 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 GINS3Q9BRX5 216 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 NMES1Q9C002 83 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 MGAT4CQ9UBM8 478 aa10.87□□□□□ -0.67
LIG1-208ENST00000595758 TRAV14DV4A0A0A6YYC5 116 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 ZFP92A6NM28 416 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 BCAP31P51572 246 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 H2BFSP57053 126 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 OXA1LQ15070 435 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 LCN12Q6JVE5 192 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 ACOT7LQ6ZUV0 252 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 C11orf1Q9H5F2 150 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 ZFAND3Q9H8U3 227 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 MLXQ9UH92 298 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 SMPXQ9UHP9 88 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 SELENOKQ9Y6D0 94 aa10.86□□□□□ -0.67
LIG1-208ENST00000595758 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 IZUMO1RA6ND01 250 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 PMS2P5A8MQ11 134 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 K7EIL1 84 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 CCNKO75909 580 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 RLN2P04090 185 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 RD3LP0DJH9 198 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 GP9P14770 177 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 CAV2P51636 162 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 BTNL8Q6UX41 500 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 OR10P1Q8NGE3 313 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 MED28Q9H204 178 aa10.85□□□□□ -0.67
LIG1-208ENST00000595758 IGKV1D-37A0A075B6S9 117 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 FAM24AA6NFZ4 105 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 TOMM40O96008 361 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 FABP1P07148 127 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 DLK1P80370 383 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 AKR1C1Q04828 323 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 THAP8Q8NA92 274 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 MRAPQ8TCY5 172 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
LIG1-208ENST00000595758 SMCO3A2RU48 225 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 DEDDO75618 318 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 PSG1P11464 419 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 NPPCP23582 126 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
LIG1-208ENST00000595758 ZNF90Q03938 601 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 ARL16Q0P5N6 197 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 GUCA2BQ16661 112 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 LRRC37A5PQ49AS3 106 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 DEFB121Q5J5C9 76 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 TMEM61Q8N0U2 210 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 WDR89Q96FK6 387 aaPredicted RBP10.83□□□□□ -0.68
LIG1-208ENST00000595758 METTL26Q96S19 204 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 TRGV9Q99603 122 aa10.83□□□□□ -0.68
LIG1-208ENST00000595758 LYRM2Q9NU23 88 aaPredicted RBP10.83□□□□□ -0.68
LIG1-208ENST00000595758 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 TRAV25A0A0B4J276 109 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 ZNF785A8K8V0 405 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 E5RGE8 158 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 FNDC10F2Z333 226 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 CHEK1O14757 476 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 CST7O76096 145 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 SCAF4O95104 1147 aaKnown RBP10.82□□□□□ -0.68
LIG1-208ENST00000595758 IL4P05112 153 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 CXCL3P19876 107 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 BMI1P35226 326 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms