RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 THBS3P49746 956 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 FBXL19-AS1Q494R0 122 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 MMD2Q8IY49 270 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 TMEM204Q9BSN7 226 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 HRNRQ86YZ3 2850 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-205ENST00000594973 C9JCJ5 164 aa13.86□□□□□ -0.19
SHKBP1-205ENST00000594973 RELBQ01201 579 aa13.86□□□□□ -0.19
SHKBP1-205ENST00000594973 MEF2CQ06413 473 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-205ENST00000594973 EFNB3Q15768 340 aa13.86□□□□□ -0.19
SHKBP1-205ENST00000594973 HEYLQ9NQ87 328 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-205ENST00000594973 NAT8BQ9UHF3 227 aa13.86□□□□□ -0.19
SHKBP1-205ENST00000594973 RNF24Q9Y225 148 aa13.86□□□□□ -0.19
SHKBP1-205ENST00000594973 SPTBN1Q01082 2364 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 TNFRSF13BO14836 293 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 IGKV1-16P04430 117 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 CT45A6P0DMU7 189 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 CT45A5P0DMU8 189 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 CT45A7P0DMV0 189 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 ARF6P62330 175 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 OR4A47Q6IF82 309 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 PRR27Q6MZM9 219 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 FAM90A9PA6NNJ1 464 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 J3QR06 171 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 SLC17A3O00476 420 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 RCHY1Q96PM5 261 aa13.85□□□□□ -0.19
SHKBP1-205ENST00000594973 A0A1W2PPV4 95 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 C15orf62A8K5M9 175 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 CD1BP29016 333 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 REG1BP48304 166 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 CX3CL1P78423 397 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 TMEM136Q6ZRR5 245 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 ADTRPQ96IZ2 230 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 H0YJW9 148 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 K7EN84 100 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 OR10J4P0C629 311 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 PSG1P11464 419 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 TMEM30BQ3MIR4 351 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 TSKUQ8WUA8 353 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 CLEC7AQ9BXN2 247 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 RPH3ALQ9UNE2 315 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 V9GYV3 84 aa13.84□□□□□ -0.19
SHKBP1-205ENST00000594973 SCO2A0A1W2PP80 73 aa13.83□□□□□ -0.2
SHKBP1-205ENST00000594973 NDUFS8O00217 210 aa13.83□□□□□ -0.2
SHKBP1-205ENST00000594973 TAX1BP3O14907 124 aa13.83□□□□□ -0.2
SHKBP1-205ENST00000594973 MYOD1P15172 320 aa13.83□□□□□ -0.2
SHKBP1-205ENST00000594973 COL8A2P25067 703 aa13.83□□□□□ -0.2
SHKBP1-205ENST00000594973 LOXP28300 417 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-205ENST00000594973 ZNF672Q499Z4 452 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-205ENST00000594973 ABHD12Q8N2K0 398 aa13.83□□□□□ -0.2
SHKBP1-205ENST00000594973 HLA-DQA1P01909 254 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 Q8N7P7 452 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 C11orf52Q96A22 123 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 TCF19Q9Y242 345 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 PKD1L2Q7Z442 2459 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 C15orf61A6NNL5 157 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 RRHO14718 337 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 CXorf1O96002 111 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 RTL8BQ17RB0 113 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 OR8I2Q8N0Y5 310 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 OR10X1Q8NGY0 326 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 OR52E5Q8NH55 327 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 HINT2Q9BX68 163 aa13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 MRPL20Q9BYC9 149 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-205ENST00000594973 FRMD6-AS1P0C7T7 363 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 LINC00869P0C866 280 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 STAG3L2P0CL84 134 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 STAG3L3P0CL85 134 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 FAM71F2Q6NXP2 309 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 PET117Q6UWS5 81 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 ZNF596Q8TC21 504 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 EAF1Q96JC9 268 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 KAAG1Q9UBP8 84 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 WDR83OSQ9Y284 106 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 TMEM238LA0A1B0GVL6 79 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 SRRM4A7MD48 611 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 DEFA4P12838 97 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 IGLL1P15814 213 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 MAJINQ3KP22 176 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 DEFB125Q8N687 156 aa13.81□□□□□ -0.2
SHKBP1-205ENST00000594973 TET2Q6N021 2002 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 BMPR1BO00238 502 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 MPDU1O75352 247 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 LY6HO94772 140 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 SRIP30626 198 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 DIAPH2-AS1Q14236 149 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 ZNF833PQ6ZTB9 187 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 ATOH7Q8N100 152 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 HIVEP3Q5T1R4 2406 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 AMY1AP04745 511 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 PRB3Q04118 309 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 OR8B3Q8NGG8 313 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 OR8B2Q96RD0 313 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 TMEM14BQ9NUH8 114 aa13.8□□□□□ -0.2
SHKBP1-205ENST00000594973 ARL14EPLP0DKL9 152 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 DLX1P56177 255 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 FOXA2Q9Y261 457 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 ASH1LQ9NR48 2969 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 CACNA1AO00555 2505 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms