RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GAFA1Q96PS6 74 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 TMEM147Q9BVK8 224 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 LY96Q9Y6Y9 160 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 COL6A6A6NMZ7 2263 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 BMPR1BO00238 502 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 CD3EP07766 207 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 TNFRSF1AP19438 455 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 SRIP30626 198 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 CX3CL1P78423 397 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 Q56UQ5 140 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 SPANXN5Q5MJ07 72 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 RAB1CQ92928 201 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 ZNF48Q96MX3 618 aaPredicted RBP12.53□□□□□ -0.4
PNKP-204ENST00000594661 COMMD5Q9GZQ3 224 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 C1RLQ9NZP8 487 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 PKDREJQ9NTG1 2253 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 K7EN84 100 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 NTF3P20783 257 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 CEACAM3P40198 252 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 FAM216AQ8WUB2 273 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 CCL13Q99616 98 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 SAP30LQ9HAJ7 183 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 GNG12Q9UBI6 72 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 V9GYV3 84 aa12.53□□□□□ -0.4
PNKP-204ENST00000594661 C2orf70A6NJV1 201 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 VSTM5A8MXK1 200 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 REG1BP48304 166 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 BRWD1-AS2P59051 145 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 CR1LQ2VPA4 569 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 TEX36Q5VZQ5 186 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 SLC25A34Q6PIV7 304 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 FAM216BQ8N7L0 139 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 OR10W1Q8NGF6 305 aa12.52□□□□□ -0.4
PNKP-204ENST00000594661 LINC00473A8K010 186 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 FAM90A26D6RGX4 464 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 MT-CO2P00403 227 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 HLA-DQA1P01909 254 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 AZU1P20160 251 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 GATA2P23769 480 aaPredicted RBP12.52□□□□□ -0.41
PNKP-204ENST00000594661 LINC00205P59089 165 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 KIAA1644Q3SXP7 199 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 MRPL54Q6P161 138 aaKnown RBP12.52□□□□□ -0.41
PNKP-204ENST00000594661 ZNF788Q6ZQV5 615 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 OR8I2Q8N0Y5 310 aa12.52□□□□□ -0.41
PNKP-204ENST00000594661 HSD17B10Q99714 261 aaKnown RBP12.52□□□□□ -0.41
PNKP-204ENST00000594661 NPY1RP25929 384 aa12.51□□□□□ -0.41
PNKP-204ENST00000594661 GPR12P47775 334 aa12.51□□□□□ -0.41
PNKP-204ENST00000594661 NPCDR1Q9BY65 106 aa12.51□□□□□ -0.41
PNKP-204ENST00000594661 DYNLRB1Q9NP97 96 aa12.51□□□□□ -0.41
PNKP-204ENST00000594661 TP73-AS1Q9UF72 201 aa12.51□□□□□ -0.41
PNKP-204ENST00000594661 PKD1L2Q7Z442 2459 aa12.51□□□□□ -0.41
PNKP-204ENST00000594661 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 C9JCJ5 164 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 OR10J4P0C629 311 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 P0C879 139 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 CRYBB3P26998 211 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 CD1BP29016 333 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 HIST1H1AQ02539 215 aaPredicted RBP12.5□□□□□ -0.41
PNKP-204ENST00000594661 C18orf32Q8TCD1 76 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 NPVFQ9HCQ7 196 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 JPT1Q9UK76 154 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 RAB29O14966 203 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 CLDN14O95500 239 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 AMY1AP04745 511 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 MC5RP33032 325 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 VWC2Q2TAL6 325 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 SPATA12Q7Z6I5 190 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 CHRDL1Q9BU40 450 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.5□□□□□ -0.41
PNKP-204ENST00000594661 CALYQ9NYX4 217 aa12.5□□□□□ -0.41
PNKP-204ENST00000594661 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
PNKP-204ENST00000594661 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 C7orf71A4D174 169 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 K7EP34 96 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 CRXO43186 299 aaPredicted RBP12.49□□□□□ -0.41
PNKP-204ENST00000594661 IGHV3-7P01780 117 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 CGB3P0DN86 165 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 CGB7P0DN87 165 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 LOXL3P58215 753 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 TFF3Q07654 80 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 EFNB3Q15768 340 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 C17orf58Q2M2W7 97 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 UTF1Q5T230 341 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 H2BFWTQ7Z2G1 175 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 CCL17Q92583 94 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 DSCAML1Q8TD84 2053 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 ARFGEF3Q5TH69 2177 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 FAM231BA6NCW3 169 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 TMEM178BH3BS89 294 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 F2RL2O00254 374 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
PNKP-204ENST00000594661 SIGMAR1Q99720 223 aa12.49□□□□□ -0.41
PNKP-204ENST00000594661 TPRP12270 2363 aaKnown RBP12.48□□□□□ -0.41
PNKP-204ENST00000594661 PMS2P5A8MQ11 134 aa12.48□□□□□ -0.41
PNKP-204ENST00000594661 SEC11AP67812 179 aa12.48□□□□□ -0.41
PNKP-204ENST00000594661 TNXAQ16473 311 aa12.48□□□□□ -0.41
PNKP-204ENST00000594661 SSBP4Q9BWG4 385 aaPredicted RBP12.48□□□□□ -0.41
PNKP-204ENST00000594661 FAM234AQ9H0X4 552 aa12.48□□□□□ -0.41
PNKP-204ENST00000594661 TANC2Q9HCD6 1990 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms