RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 A8MZ25 164 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 CHEK1O14757 476 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 SCAF4O95104 1147 aaKnown RBP16.45■□□□□ 0.22
HOMER3-206ENST00000594439 CD7P09564 240 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 FRMD6-AS1P0C7T7 363 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 IGHV4-30-4P0DP06 118 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 GPX4P36969 197 aaPredicted RBP16.45■□□□□ 0.22
HOMER3-206ENST00000594439 CD81P60033 236 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 POLR2GP62487 172 aaKnown RBP eCLIP16.45■□□□□ 0.22
HOMER3-206ENST00000594439 RAB11AP62491 216 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 C12orf45Q8N5I9 185 aaPredicted RBP16.45■□□□□ 0.22
HOMER3-206ENST00000594439 ACY3Q96HD9 319 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 NEURL2Q9BR09 285 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 GINS3Q9BRX5 216 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 RHPN1-AS1Q9BWJ2 59 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 C19orf73Q9NVV2 129 aa16.45■□□□□ 0.22
HOMER3-206ENST00000594439 IGHV3-49A0A0A0MS15 119 aa16.44■□□□□ 0.22
HOMER3-206ENST00000594439 CCSO14618 274 aa16.44■□□□□ 0.22
HOMER3-206ENST00000594439 IL5P05113 134 aa16.44■□□□□ 0.22
HOMER3-206ENST00000594439 OR10J1P30954 320 aa16.44■□□□□ 0.22
HOMER3-206ENST00000594439 RBPMS2Q6ZRY4 209 aaKnown RBP16.44■□□□□ 0.22
HOMER3-206ENST00000594439 NRARPQ7Z6K4 114 aa16.44■□□□□ 0.22
HOMER3-206ENST00000594439 ASCL2Q99929 193 aa16.44■□□□□ 0.22
HOMER3-206ENST00000594439 YPEL3P61236 119 aaPredicted RBP16.43■□□□□ 0.22
HOMER3-206ENST00000594439 RPP30P78346 268 aaKnown RBP16.43■□□□□ 0.22
HOMER3-206ENST00000594439 PAIP2BQ9ULR5 123 aaKnown RBP16.43■□□□□ 0.22
HOMER3-206ENST00000594439 IGHV3OR16-13A0A075B7E8 117 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 IGHV3-74A0A0B4J1X5 117 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 PRSS46E5RG02 174 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 H3BP45 60 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 TSPAN4O14817 238 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 GAMTQ14353 236 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 SPANXN5Q5MJ07 72 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 LAMTOR1Q6IAA8 161 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 SLC35E1Q96K37 410 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 RNF2Q99496 336 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 GSKIPQ9P0R6 139 aa16.42■□□□□ 0.22
HOMER3-206ENST00000594439 SSSCA1O60232 199 aa16.41■□□□□ 0.22
HOMER3-206ENST00000594439 SCGB1D2O95969 90 aa16.41■□□□□ 0.22
HOMER3-206ENST00000594439 APOHP02749 345 aaPredicted RBP16.41■□□□□ 0.22
HOMER3-206ENST00000594439 NHLRC4P0CG21 123 aaPredicted RBP16.41■□□□□ 0.22
HOMER3-206ENST00000594439 SBSPONQ8IVN8 264 aa16.41■□□□□ 0.22
HOMER3-206ENST00000594439 SMIM8Q96KF7 97 aa16.41■□□□□ 0.22
HOMER3-206ENST00000594439 SPAG8Q99932 426 aaPredicted RBP16.41■□□□□ 0.22
HOMER3-206ENST00000594439 VSIRQ9H7M9 311 aa16.41■□□□□ 0.22
HOMER3-206ENST00000594439 STRAPQ9Y3F4 350 aaKnown RBP16.41■□□□□ 0.22
HOMER3-206ENST00000594439 PAX9P55771 341 aa16.4■□□□□ 0.22
HOMER3-206ENST00000594439 DEFA1P59665 94 aa16.4■□□□□ 0.22
HOMER3-206ENST00000594439 DEFA3P59666 94 aa16.4■□□□□ 0.22
HOMER3-206ENST00000594439 Q8WTZ3 238 aa16.4■□□□□ 0.22
HOMER3-206ENST00000594439 ST8SIA2Q92186 375 aa16.4■□□□□ 0.22
HOMER3-206ENST00000594439 WFDC10AQ9H1F0 79 aa16.4■□□□□ 0.22
HOMER3-206ENST00000594439 PSENENQ9NZ42 101 aa16.4■□□□□ 0.22
HOMER3-206ENST00000594439 RCL1Q9Y2P8 373 aaKnown RBP16.4■□□□□ 0.22
HOMER3-206ENST00000594439 IGKV1D-37A0A075B6S9 117 aa16.39■□□□□ 0.21
HOMER3-206ENST00000594439 TOMM40O96008 361 aa16.39■□□□□ 0.21
HOMER3-206ENST00000594439 MBPP02686 304 aaPredicted RBP16.39■□□□□ 0.21
HOMER3-206ENST00000594439 FAM90A2PQ658T7 463 aa16.39■□□□□ 0.21
HOMER3-206ENST00000594439 LILRB2Q8N423 598 aa16.39■□□□□ 0.21
HOMER3-206ENST00000594439 COL7A1Q02388 2944 aa16.39■□□□□ 0.21
HOMER3-206ENST00000594439 FAM25EA8MYX2 175 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 OR11H12B2RN74 326 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 INMT-MINDY4F8WBC2 141 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 NPPCP23582 126 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 CRYBB3P26998 211 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 BMI1P35226 326 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 DEFB125Q8N687 156 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 METTL26Q96S19 204 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 RAB40CQ96S21 281 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 MARVELD1Q9BSK0 173 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 TUBA4BQ9H853 241 aa16.38■□□□□ 0.21
HOMER3-206ENST00000594439 IGHV3-66A0A0C4DH42 116 aa16.37■□□□□ 0.21
HOMER3-206ENST00000594439 C5orf51A6NDU8 294 aa16.37■□□□□ 0.21
HOMER3-206ENST00000594439 RD3LP0DJH9 198 aa16.37■□□□□ 0.21
HOMER3-206ENST00000594439 PSG1P11464 419 aa16.37■□□□□ 0.21
HOMER3-206ENST00000594439 C2orf50Q96LR7 162 aa16.37■□□□□ 0.21
HOMER3-206ENST00000594439 GPN1Q9HCN4 374 aaPredicted RBP16.37■□□□□ 0.21
HOMER3-206ENST00000594439 U3KQE9 123 aa16.37■□□□□ 0.21
HOMER3-206ENST00000594439 ZFP92A6NM28 416 aa16.36■□□□□ 0.21
HOMER3-206ENST00000594439 PMS2P5A8MQ11 134 aa16.36■□□□□ 0.21
HOMER3-206ENST00000594439 PRAF2O60831 178 aa16.36■□□□□ 0.21
HOMER3-206ENST00000594439 TAS2R30P59541 319 aa16.36■□□□□ 0.21
HOMER3-206ENST00000594439 USF2Q15853 346 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-206ENST00000594439 TMEM14EPQ6UXP3 125 aa16.36■□□□□ 0.21
HOMER3-206ENST00000594439 LINC00322Q6ZN03 302 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-206ENST00000594439 TCF24Q7RTU0 167 aa16.36■□□□□ 0.21
HOMER3-206ENST00000594439 THAP8Q8NA92 274 aa16.36■□□□□ 0.21
HOMER3-206ENST00000594439 IGKV1OR2-108A0A075B7D4 117 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 OR4C46A6NHA9 309 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 SNRPGP15A8MWD9 76 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 TSC22D2O75157 780 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 IL4P05112 153 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 ZNF90Q03938 601 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 IL15RAQ13261 267 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 GSG1LQ6UXU4 331 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 TMEM231Q9H6L2 316 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 SRD5A3Q9H8P0 318 aa16.35■□□□□ 0.21
HOMER3-206ENST00000594439 HUWE1Q7Z6Z7 4374 aaKnown RBP16.35■□□□□ 0.21
HOMER3-206ENST00000594439 A0A1W2PS18 150 aa16.34■□□□□ 0.21
HOMER3-206ENST00000594439 C7orf66A4D0T2 115 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms