RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 IGLC1P0CG04 106 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 FOLR2P14207 255 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 CAV2P51636 162 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 ELLP55199 621 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-221ENST00000593026 GAMTQ14353 236 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 TIGITQ495A1 244 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 TM4SF20Q53R12 229 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 OR8G2PQ6IF36 304 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 HAPLN4Q86UW8 402 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 OR1S2Q8NGQ3 325 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 DYNLRB2Q8TF09 96 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 ZNF414Q96IQ9 312 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 MED28Q9H204 178 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
DDX39A-221ENST00000593026 IGLV1-51P01701 117 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 RLN2P04090 185 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 EDN2P20800 178 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 CBLN1P23435 193 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 BCAP31P51572 246 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 KRTAP10-11P60412 298 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 LRRC37A5PQ49AS3 106 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 ADAMTSL5Q6ZMM2 481 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 ACOT7LQ6ZUV0 252 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 OR10P1Q8NGE3 313 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 MARC2Q969Z3 335 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 C11orf1Q9H5F2 150 aa11.34□□□□□ -0.59
DDX39A-221ENST00000593026 PUS1Q9Y606 427 aaKnown RBP eCLIP11.34□□□□□ -0.59
DDX39A-221ENST00000593026 ZFP92A6NM28 416 aa11.33□□□□□ -0.6
DDX39A-221ENST00000593026 PMS2P5A8MQ11 134 aa11.33□□□□□ -0.6
DDX39A-221ENST00000593026 K7EMT4 169 aa11.33□□□□□ -0.6
DDX39A-221ENST00000593026 DEDDO75618 318 aa11.33□□□□□ -0.6
DDX39A-221ENST00000593026 CCNKO75909 580 aa11.33□□□□□ -0.6
DDX39A-221ENST00000593026 YPEL3P61236 119 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-221ENST00000593026 DEFA6Q01524 100 aa11.33□□□□□ -0.6
DDX39A-221ENST00000593026 TOMM20LQ6UXN7 152 aa11.33□□□□□ -0.6
DDX39A-221ENST00000593026 GINS3Q9BRX5 216 aa11.33□□□□□ -0.6
DDX39A-221ENST00000593026 MRPL27Q9P0M9 148 aaKnown RBP11.33□□□□□ -0.6
DDX39A-221ENST00000593026 SMCO3A2RU48 225 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 FAM24AA6NFZ4 105 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 ZNF207O43670 478 aaKnown RBP11.32□□□□□ -0.6
DDX39A-221ENST00000593026 PRB2P02812 416 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-221ENST00000593026 PET100P0DJ07 73 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 CXCL3P19876 107 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 DLK1P80370 383 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 AKR1C1Q04828 323 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 FCN2Q15485 313 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 Q8WTZ3 238 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 PPP1R1CQ8WVI7 109 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 WDR89Q96FK6 387 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-221ENST00000593026 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
DDX39A-221ENST00000593026 LYRM2Q9NU23 88 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-221ENST00000593026 TECRQ9NZ01 308 aaKnown RBP11.32□□□□□ -0.6
DDX39A-221ENST00000593026 E5RGE8 158 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 SCAF4O95104 1147 aaKnown RBP11.31□□□□□ -0.6
DDX39A-221ENST00000593026 FABP1P07148 127 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 RD3LP0DJH9 198 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 RRAS2P62070 204 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-221ENST00000593026 LCN12Q6JVE5 192 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 BTNL8Q6UX41 500 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 STX12Q86Y82 276 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 OR11H7Q8NGC8 314 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 OR2K2Q8NGT1 345 aa11.31□□□□□ -0.6
DDX39A-221ENST00000593026 AURKAIP1Q9NWT8 199 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-221ENST00000593026 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-221ENST00000593026 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 TRAV14DV4A0A0A6YYC5 116 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 IGSF23A1L1A6 192 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 CST7O76096 145 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 TOMM40O96008 361 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 SLC38A11Q08AI6 406 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 DEFB114Q30KQ6 69 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 CD300EQ496F6 205 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-221ENST00000593026 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 TMEM252Q8N6L7 170 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 THAP8Q8NA92 274 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 TRGV9Q99603 122 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 OR5AC2Q9NZP5 309 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 MLXQ9UH92 298 aa11.3□□□□□ -0.6
DDX39A-221ENST00000593026 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 IGHV7-4-1A0A0J9YVY3 117 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 H0YIZ8 118 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 MPC2O95563 127 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 P2RY1P47900 373 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 SULT1A1P50225 295 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 ZNF90Q03938 601 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 ARL16Q0P5N6 197 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 TMEM217Q8N7C4 229 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 PRR25Q96S07 402 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 SMPXQ9UHP9 88 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
DDX39A-221ENST00000593026 IGHV3-49A0A0A0MS15 119 aa11.28□□□□□ -0.6
DDX39A-221ENST00000593026 IL4P05112 153 aa11.28□□□□□ -0.6
DDX39A-221ENST00000593026 PSG1P11464 419 aa11.28□□□□□ -0.6
DDX39A-221ENST00000593026 GP9P14770 177 aa11.28□□□□□ -0.6
DDX39A-221ENST00000593026 NPPCP23582 126 aa11.28□□□□□ -0.6
DDX39A-221ENST00000593026 BMI1P35226 326 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms