RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	OR9G1	Q8NH87	305 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	SMIM12	Q96EX1	92 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	MRPL32	Q9BYC8	188 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	OR51B2	Q9Y5P1	312 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	INTS1	Q8N201	2190 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	HEATR1	Q9H583	2144 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	TRAV5	A0A0B4J249	113 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	PSMB11	A5LHX3	300 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	HSBP1L1	C9JCN9	74 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	TMEM238	C9JI98	176 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	PEX7	O00628	323 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	HIST1H1E	P10412	219 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	HIST1H1A	Q02539	215 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	PRR31	Q5SQ13	230 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	VHLL	Q6RSH7	139 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	PEF1	Q9UBV8	284 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	ZNF292	O60281	2723 aa		11.73	□□□□□ -0.53
RFX2-222	ENST00000592546	TNC	P24821	2201 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	TIMM8A	O60220	97 aa	Predicted RBP	11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	IGLC1	P0CG04	106 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546		A0A087X0K7	114 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	F2RL2	O00254	374 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	PRDX2	P32119	198 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	FOXA3	P55318	350 aa	Predicted RBP	11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	HBB	P68871	147 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	CR1L	Q2VPA4	569 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	ZNF329	Q86UD4	541 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	MEGF9	Q9H1U4	602 aa		11.72	□□□□□ -0.53
RFX2-222	ENST00000592546	CAD	P27708	2225 aa		11.71	□□□□□ -0.53
RFX2-222	ENST00000592546	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.71	□□□□□ -0.53
RFX2-222	ENST00000592546	HOXC12	P31275	282 aa		11.71	□□□□□ -0.53
RFX2-222	ENST00000592546	MLANA	Q16655	118 aa		11.71	□□□□□ -0.53
RFX2-222	ENST00000592546	UTF1	Q5T230	341 aa		11.71	□□□□□ -0.53
RFX2-222	ENST00000592546	ZNF841	Q6ZN19	808 aa		11.71	□□□□□ -0.53
RFX2-222	ENST00000592546	MS4A6A	Q9H2W1	248 aa		11.71	□□□□□ -0.53
RFX2-222	ENST00000592546	CD24	P25063	80 aa		11.71	□□□□□ -0.54
RFX2-222	ENST00000592546	PRCD	Q00LT1	54 aa		11.71	□□□□□ -0.54
RFX2-222	ENST00000592546	POU2AF1	Q16633	256 aa		11.71	□□□□□ -0.54
RFX2-222	ENST00000592546	SARAF	Q96BY9	339 aa		11.71	□□□□□ -0.54
RFX2-222	ENST00000592546	PYY	P10082	97 aa		11.7	□□□□□ -0.54
RFX2-222	ENST00000592546	PET117	Q6UWS5	81 aa		11.7	□□□□□ -0.54
RFX2-222	ENST00000592546	TCF24	Q7RTU0	167 aa		11.7	□□□□□ -0.54
RFX2-222	ENST00000592546	SAP30	O75446	220 aa		11.7	□□□□□ -0.54
RFX2-222	ENST00000592546	GPR183	P32249	361 aa		11.7	□□□□□ -0.54
RFX2-222	ENST00000592546	C2orf83	Q53S99	150 aa		11.7	□□□□□ -0.54
RFX2-222	ENST00000592546	PRND	Q9UKY0	176 aa		11.7	□□□□□ -0.54
RFX2-222	ENST00000592546	ZNF257	Q9Y2Q1	563 aa		11.7	□□□□□ -0.54
RFX2-222	ENST00000592546	LIPF	P07098	398 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	OR5AL1	P0C617	328 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	SAA2	P0DJI9	122 aa	Predicted RBP	11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	LRRC29	Q8WV35	223 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	H1FX	Q92522	213 aa	Known RBP	11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	LEAP2	Q969E1	77 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	MAP1LC3C	Q9BXW4	147 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	DKK4	Q9UBT3	224 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	IGKV1D-17	A0A075B6S4	117 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	IGHV1-18	A0A0C4DH31	117 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	C7orf71	A4D174	169 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	MSMP	Q1L6U9	139 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	IGFL2	Q6UWQ7	119 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	C2orf91	Q6ZV80	131 aa		11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	MCRIP2	Q9BUT9	160 aa	Known RBP	11.69	□□□□□ -0.54
RFX2-222	ENST00000592546	CACNA1G	O43497	2377 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	MGST3	O14880	152 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	ATP5I	P56385	69 aa	Predicted RBP	11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	CD69	Q07108	199 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	CT45A1	Q5HYN5	189 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	CT45A3	Q8NHU0	189 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	ZC2HC1A	Q96GY0	325 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	ZNF714	Q96N38	554 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	PAXX	Q9BUH6	204 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	PLSCR4	Q9NRQ2	329 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	ICE1	Q9Y2F5	2266 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	MGA	Q8IWI9	3026 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	TRAV17	A0A0B4J275	112 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	RNASE2	P10153	161 aa	Known RBP	11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	DEFB109B	Q30KR1	87 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	UFSP1	Q6NVU6	142 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	CALY	Q9NYX4	217 aa		11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.68	□□□□□ -0.54
RFX2-222	ENST00000592546	GVINP1	Q7Z2Y8	2422 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	UPK2	O00526	184 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	IGLV1-44	P01699	117 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	RIPPLY3	P57055	190 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	GNG5	P63218	68 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	FOXE3	Q13461	319 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	SPRN	Q5BIV9	151 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	FER1L6-AS1	Q8NA97	138 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	OR2Z1	Q8NG97	314 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	OR1L8	Q8NGR8	309 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	GTSF1	Q8WW33	167 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	SPOCK3	Q9BQ16	436 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	SOX21	Q9Y651	276 aa	Predicted RBP	11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	TEX50	A0A1B0GTY4	177 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	GAGE10	A6NGK3	116 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	TM4SF5	O14894	197 aa		11.67	□□□□□ -0.54
RFX2-222	ENST00000592546	NBEAP1	P0C6P0	100 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms