RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 VHLLQ6RSH7 139 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 Q6ZN92 141 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 FAM19A2Q8N3H0 131 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 OR10W1Q8NGF6 305 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 C18orf32Q8TCD1 76 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 GRAMD2BQ96HH9 432 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 RBM14Q96PK6 669 aaKnown RBP8.79□□□□□ -1
VPS4B-206ENST00000591475 GAFA1Q96PS6 74 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 CHRDL1Q9BU40 450 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 AMMECR1Q9Y4X0 333 aaPredicted RBP8.79□□□□□ -1
VPS4B-206ENST00000591475 EPG5Q9HCE0 2579 aa8.79□□□□□ -1
VPS4B-206ENST00000591475 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 COX7A2P2O60397 106 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 CA1P00915 261 aaPredicted RBP8.78□□□□□ -1
VPS4B-206ENST00000591475 SELENOVP59797 346 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 SLAQ13239 276 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 DEFB108BQ8NET1 73 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 OR1L4Q8NGR5 311 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 OSR1Q8TAX0 266 aaPredicted RBP8.78□□□□□ -1
VPS4B-206ENST00000591475 FAM168AQ92567 244 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 MBD6Q96DN6 1003 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 SSBP3Q9BWW4 388 aaPredicted RBP8.78□□□□□ -1
VPS4B-206ENST00000591475 POLEQ07864 2286 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 RELNP78509 3460 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 IGLV3-9A0A075B6K5 115 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 APOA2P02652 100 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 MFAP2P55001 183 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 TNFAIP6P98066 277 aaPredicted RBP8.78□□□□□ -1
VPS4B-206ENST00000591475 RELQ04864 619 aaPredicted RBP8.78□□□□□ -1
VPS4B-206ENST00000591475 PMCHL1Q16048 86 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 TIMM23BQ5SRD1 257 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 MORN5Q5VZ52 161 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 C10orf113Q5VZT2 155 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 ZNF474Q6S9Z5 364 aaPredicted RBP8.78□□□□□ -1
VPS4B-206ENST00000591475 C11orf42Q8N5U0 333 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 OR2T6Q8NHC8 308 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 CCL13Q99616 98 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 PAXXQ9BUH6 204 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 WNT10AQ9GZT5 417 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 NDUFA4L2Q9NRX3 87 aa8.78□□□□□ -1
VPS4B-206ENST00000591475 CACNA1BQ00975 2339 aa8.77□□□□□ -1
VPS4B-206ENST00000591475 PEX7O00628 323 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 HSBP1O75506 76 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 BPIFB3P59826 476 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 KLF5Q13887 457 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-206ENST00000591475 C3orf36Q3SXR2 165 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 ZNF788Q6ZQV5 615 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 ZNF833PQ6ZTB9 187 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 ZNF329Q86UD4 541 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 LINC00479Q96M42 142 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 HARBI1Q96MB7 349 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 ZNF355PQ9NSJ1 428 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 DCAF16Q9NXF7 216 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 LAMTOR2Q9Y2Q5 125 aa8.77□□□□□ -1.01
VPS4B-206ENST00000591475 A0A1W2PN81 502 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 hADV38S2A0JD32 116 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 INS-IGF2F8WCM5 200 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 CCL21O00585 134 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 SIAH2O43255 324 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 PYYP10082 97 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 RPL8P62917 257 aaKnown RBP8.76□□□□□ -1.01
VPS4B-206ENST00000591475 FAM216BQ8N7L0 139 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 NUP35Q8NFH5 326 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 NUDT10Q8NFP7 164 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 NUDT11Q96G61 164 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 ZNF430Q9H8G1 570 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-206ENST00000591475 SAP30LQ9HAJ7 183 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 ZNRD1Q9P1U0 126 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 CBY1Q9Y3M2 126 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 CFAP46Q8IYW2 2715 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 M0R2Z0 102 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 OR2J3O76001 311 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 HIST1H1EP10412 219 aaKnown RBP8.76□□□□□ -1.01
VPS4B-206ENST00000591475 TNFSF4P23510 183 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 TNXAQ16473 311 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 DMRTA1Q5VZB9 504 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 STPG4Q8N801 248 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 CLEC7AQ9BXN2 247 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 MRPL20Q9BYC9 149 aaKnown RBP8.76□□□□□ -1.01
VPS4B-206ENST00000591475 JKAMPQ9P055 326 aa8.76□□□□□ -1.01
VPS4B-206ENST00000591475 TNCP24821 2201 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 TRAV34A0A0B4J273 112 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 TCRBV4S1A1TA0A5B7 111 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 C20orf202A1L168 122 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 FAM181BA6NEQ2 426 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 IGHV1-46P01743 117 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 SUB1P53999 127 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS4B-206ENST00000591475 TMEM177Q53S58 311 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 GDF5OSQ5U4N7 250 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 ATP5L2Q7Z4Y8 100 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 GAL3ST2Q9H3Q3 398 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 MRPS16Q9Y3D3 137 aaKnown RBP8.75□□□□□ -1.01
VPS4B-206ENST00000591475 LINC00312Q9Y6C7 94 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 DYSFO75923 2080 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 H0YJW9 148 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 SSBP2P81877 361 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-206ENST00000591475 ASPHD1Q5U4P2 390 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 LCN12Q6JVE5 192 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 PRR27Q6MZM9 219 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 PATE2Q6UY27 113 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms