RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SLC16A13Q7RTY0 426 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 NRARPQ7Z6K4 114 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 SBSPONQ8IVN8 264 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 DEFB125Q8N687 156 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 OR4D5Q8NGN0 318 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 OR2K2Q8NGT1 345 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 RNF2Q99496 336 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 U3KQ87 197 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 IGHV7-4-1A0A0J9YVY3 117 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 RPS10-NUDT3A0A1W2PQS6 291 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 FAM90A26D6RGX4 464 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 CHEK1O14757 476 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 CCNKO75909 580 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 IFNA21P01568 189 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 OR10J1P30954 320 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 PAX9P55771 341 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 IAH1Q2TAA2 248 aaPredicted RBP8.63□□□□□ -1.03
VMP1-211ENST00000591315 ZBTB8BQ8NAP8 495 aaPredicted RBP8.63□□□□□ -1.03
VMP1-211ENST00000591315 TMEM116Q8NCL8 245 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 ZNF431Q8TF32 576 aaPredicted RBP8.63□□□□□ -1.03
VMP1-211ENST00000591315 ST8SIA2Q92186 375 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 MARC2Q969Z3 335 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 NEURL2Q9BR09 285 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 RHPN1-AS1Q9BWJ2 59 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 C19orf73Q9NVV2 129 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 GSKIPQ9P0R6 139 aa8.63□□□□□ -1.03
VMP1-211ENST00000591315 IGKV3-7A0A075B6H7 116 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 IGKV1D-37A0A075B6S9 117 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 TRAV14DV4A0A0A6YYC5 116 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 SSSCA1O60232 199 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 MED6O75586 246 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 SCGB1D2O95969 90 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 SLC25A4P12235 298 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 NKX2-1P43699 371 aaPredicted RBP8.62□□□□□ -1.03
VMP1-211ENST00000591315 GAMTQ14353 236 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 SPANXN5Q5MJ07 72 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 C12orf45Q8N5I9 185 aaPredicted RBP8.62□□□□□ -1.03
VMP1-211ENST00000591315 ENKURQ8TC29 256 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 CACFD1Q9UGQ2 172 aa8.62□□□□□ -1.03
VMP1-211ENST00000591315 PIGBOS1A0A0B4J2F0 54 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 RBMY1BA6NDE4 496 aaKnown RBP8.61□□□□□ -1.03
VMP1-211ENST00000591315 RBMY1EA6NEQ0 496 aaKnown RBP8.61□□□□□ -1.03
VMP1-211ENST00000591315 FAM25EA8MYX2 175 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 PRSS46E5RG02 174 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 MBPP02686 304 aaPredicted RBP8.61□□□□□ -1.03
VMP1-211ENST00000591315 RBMY1DP0C7P1 496 aaKnown RBP8.61□□□□□ -1.03
VMP1-211ENST00000591315 TFPI2P48307 235 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 ZNF90Q03938 601 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 RBPMS2Q6ZRY4 209 aaKnown RBP8.61□□□□□ -1.03
VMP1-211ENST00000591315 GTSCR1Q86UQ5 136 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 NOXA1Q86UR1 476 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 GBGT1Q8N5D6 347 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 OR1S2Q8NGQ3 325 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 UBQLN2Q9UHD9 624 aa8.61□□□□□ -1.03
VMP1-211ENST00000591315 RCL1Q9Y2P8 373 aaKnown RBP8.61□□□□□ -1.03
VMP1-211ENST00000591315 IGKV1OR2-108A0A075B7D4 117 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 TRAV25A0A0B4J276 109 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 OR11H12B2RN74 326 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 DFFBO76075 338 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 SIX6O95475 246 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 IL5P05113 134 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 GPX4P36969 197 aaPredicted RBP8.6□□□□□ -1.03
VMP1-211ENST00000591315 DCTN2Q13561 401 aaKnown RBP8.6□□□□□ -1.03
VMP1-211ENST00000591315 OR2F1Q13607 317 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 USF2Q15853 346 aaPredicted RBP8.6□□□□□ -1.03
VMP1-211ENST00000591315 FAM90A2PQ658T7 463 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 ETFRF1Q6IPR1 90 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 CITED4Q96RK1 184 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 VSIRQ9H7M9 311 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 TUBA4BQ9H853 241 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 PSENENQ9NZ42 101 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 AGRNO00468 2067 aa8.6□□□□□ -1.03
VMP1-211ENST00000591315 TRAV30A0A087WSZ9 112 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 C5orf51A6NDU8 294 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 A8MZ25 164 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 INMT-MINDY4F8WBC2 141 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 TSPAN4O14817 238 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 PSG1P11464 419 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 ATP5IP56385 69 aaPredicted RBP8.59□□□□□ -1.03
VMP1-211ENST00000591315 YPEL3P61236 119 aaPredicted RBP8.59□□□□□ -1.03
VMP1-211ENST00000591315 RAB11AP62491 216 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 ARL16Q0P5N6 197 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 ZNF124Q15973 351 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 TMEM182Q6ZP80 229 aaPredicted RBP8.59□□□□□ -1.03
VMP1-211ENST00000591315 TCF24Q7RTU0 167 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 OR51G1Q8NGK1 321 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 SLC35E1Q96K37 410 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 SMIM8Q96KF7 97 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 CIB3Q96Q77 187 aaPredicted RBP8.59□□□□□ -1.03
VMP1-211ENST00000591315 GINS3Q9BRX5 216 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 SRD5A3Q9H8P0 318 aa8.59□□□□□ -1.03
VMP1-211ENST00000591315 STRAPQ9Y3F4 350 aaKnown RBP8.59□□□□□ -1.03
VMP1-211ENST00000591315 DNAH7Q8WXX0 4024 aa8.58□□□□□ -1.04
VMP1-211ENST00000591315 ZFP92A6NM28 416 aa8.58□□□□□ -1.04
VMP1-211ENST00000591315 K7EPK0 472 aa8.58□□□□□ -1.04
VMP1-211ENST00000591315 TOMM40O96008 361 aa8.58□□□□□ -1.04
VMP1-211ENST00000591315 IL4P05112 153 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms