RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LOC389332A0A1B0GUA5 103 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 H0YJW9 148 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 GPR183P32249 361 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 NHLH1Q02575 133 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 TMEM177Q53S58 311 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 AGMATQ9BSE5 352 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 MRPL18Q9H0U6 180 aaKnown RBP11.89□□□□□ -0.51
RETREG3-208ENST00000589797 CBLN4Q9NTU7 201 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 FRYQ5TBA9 3013 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 OR2T8A6NH00 312 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 GOSR1O95249 250 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 IGHV3-11P01762 117 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 Q6ZSR3 168 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 SLC25A48Q6ZT89 311 aaKnown RBP11.89□□□□□ -0.51
RETREG3-208ENST00000589797 HSPB9Q9BQS6 159 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 THBDP07204 575 aa11.88□□□□□ -0.51
RETREG3-208ENST00000589797 BRD3OSQ6XYD6 125 aa11.88□□□□□ -0.51
RETREG3-208ENST00000589797 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
RETREG3-208ENST00000589797 CA7P43166 264 aa11.88□□□□□ -0.51
RETREG3-208ENST00000589797 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
RETREG3-208ENST00000589797 MFAP4P55083 255 aa11.88□□□□□ -0.51
RETREG3-208ENST00000589797 IGLV3-9A0A075B6K5 115 aa11.88□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H1EP10412 219 aaKnown RBP11.88□□□□□ -0.51
RETREG3-208ENST00000589797 LOXL3P58215 753 aa11.88□□□□□ -0.51
RETREG3-208ENST00000589797 SRIP30626 198 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 AP1S3Q96PC3 154 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 NBEAQ8NFP9 2946 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 A0A087X0M5 115 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 A0A1B0GX30 115 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BKO60814 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 APCSP02743 223 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BJP06899 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BOP23527 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BBP33778 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BDP58876 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BCP62807 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST2H2BEQ16778 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-208ENST00000589797 NUP37Q8NFH4 326 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 OR1P1Q8NH06 330 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BHQ93079 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BNQ99877 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 HIST1H2BMQ99879 126 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 VAMP8Q9BV40 100 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 GGACTQ9BVM4 153 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 PKD1L2Q7Z442 2459 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 IGHV1-3A0A0C4DH29 117 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 CXorf65A6NEN9 183 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 SMIM6P0DI80 62 aa11.87□□□□□ -0.51
RETREG3-208ENST00000589797 C20orf202A1L168 122 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 CORTO00230 105 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 CD33P20138 364 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 CDX1P47902 265 aaPredicted RBP11.86□□□□□ -0.51
RETREG3-208ENST00000589797 SCGB2A2Q13296 93 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 FA2HQ7L5A8 372 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 ATOH7Q8N100 152 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 C11orf42Q8N5U0 333 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 MAPK1IP1LQ8NDC0 245 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 CCL19Q99731 98 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 C7orf69Q9H7B7 122 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 FBXL7Q9UJT9 491 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 CHD3Q12873 2000 aaKnown RBP11.86□□□□□ -0.51
RETREG3-208ENST00000589797 M0R2Z0 102 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 CCKARP32238 428 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 UNQ6494/PRO21346Q6UXR6 183 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 FAM90A2PQ658T7 463 aa11.86□□□□□ -0.51
RETREG3-208ENST00000589797 TBX15Q96SF7 602 aa11.85□□□□□ -0.51
RETREG3-208ENST00000589797 NACAE9PAV3 2078 aa11.85□□□□□ -0.51
RETREG3-208ENST00000589797 UQCRFS1P47985 274 aa11.85□□□□□ -0.51
RETREG3-208ENST00000589797 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
RETREG3-208ENST00000589797 FAM169BQ8N8A8 192 aa11.85□□□□□ -0.51
RETREG3-208ENST00000589797 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
RETREG3-208ENST00000589797 NBR2O15453 112 aa11.85□□□□□ -0.51
RETREG3-208ENST00000589797 LOXP28300 417 aaPredicted RBP11.85□□□□□ -0.51
RETREG3-208ENST00000589797 GBGT1Q8N5D6 347 aa11.85□□□□□ -0.51
RETREG3-208ENST00000589797 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
RETREG3-208ENST00000589797 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
RETREG3-208ENST00000589797 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
RETREG3-208ENST00000589797 TRAV8-1A0A0A6YYK1 113 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 PRSS8Q16651 343 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 CLEC19AQ6UXS0 136 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 CACNG8Q8WXS5 425 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 CTSZQ9UBR2 303 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
RETREG3-208ENST00000589797 USP34Q70CQ2 3546 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 IGKV3-20P01619 116 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 NEU4Q8WWR8 484 aaPredicted RBP11.84□□□□□ -0.51
RETREG3-208ENST00000589797 FAM168AQ92567 244 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 BET1LQ9NYM9 111 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 G0S2P27469 103 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 IGFL4Q6B9Z1 124 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 C5orf30Q96GV9 206 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 DUX5Q96PT3 197 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 C21orf62Q9NYP8 219 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms