RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 C21orf62Q9NYP8 219 aa12.13□□□□□ -0.47
SMARCA4-214ENST00000589677 GLRXP35754 106 aa12.13□□□□□ -0.47
SMARCA4-214ENST00000589677 DMRTC2Q8IXT2 367 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-214ENST00000589677 DDB2Q92466 427 aa12.13□□□□□ -0.47
SMARCA4-214ENST00000589677 PATJQ8NI35 1801 aa12.13□□□□□ -0.47
SMARCA4-214ENST00000589677 IGKV1-27A0A075B6S5 117 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 PAX1P15863 534 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 LINC00312Q9Y6C7 94 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 SEC16AO15027 2179 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 RHOGP84095 191 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 DYNLRB2Q8TF09 96 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 BRCA1P38398 1863 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 PSME4Q14997 1843 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 PLNP26678 52 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 LHX2P50458 406 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 LAGE3Q14657 143 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 ATXN8Q156A1 80 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 FAM106AQ4KMX7 169 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 D6R8Y8 96 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 FOXH1O75593 365 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 OR13C6PQ8NH95 151 aa12.12□□□□□ -0.47
SMARCA4-214ENST00000589677 K7EP13 123 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 CEACAM4O75871 244 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 RFPL3SP0C7P2 107 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 C1orf162Q8NEQ5 155 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 IGKV3D-15A0A087WSY6 115 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 DOCK4Q8N1I0 1966 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 SELLP14151 372 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 PRTN3P24158 256 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 FOXC1Q12948 553 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 TRIP6Q15654 476 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 ARPC1AQ92747 370 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 SLC50A1Q9BRV3 221 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 IGHV2-26A0A0B4J1V2 119 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 RTN4RL2Q86UN3 420 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 C18orf32Q8TCD1 76 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 TNFRSF18Q9Y5U5 241 aa12.11□□□□□ -0.47
SMARCA4-214ENST00000589677 NUP37Q8NFH4 326 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 LYPD6BQ8NI32 183 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 CHAC1Q9BUX1 264 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 GFRA4Q9GZZ7 299 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 A0A1B0GUS0 222 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 K7EP34 96 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 JMJD8Q96S16 334 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 TRAV2A0A0B4J234 112 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 PF4V1P10720 104 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 RNF125Q96EQ8 232 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 PNRC2Q9NPJ4 139 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 RP1P56715 2156 aa12.1□□□□□ -0.47
SMARCA4-214ENST00000589677 TCRAP04437 139 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 CDCP2Q5VXM1 449 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 NABP1Q96AH0 204 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 ATP6V0BQ99437 205 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 SELENOKQ9Y6D0 94 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 ALPK2Q86TB3 2170 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 FNDC10F2Z333 226 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 FAM71F2Q6NXP2 309 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 SLC25A39Q9BZJ4 359 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 A0A1W2PR77 199 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 TMEM42Q69YG0 159 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 DEFB124Q8NES8 71 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 CECR9P0C854 216 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 TMEM155Q4W5P6 130 aa12.09□□□□□ -0.47
SMARCA4-214ENST00000589677 TIAF1O95411 115 aa12.08□□□□□ -0.47
SMARCA4-214ENST00000589677 IFI27P40305 119 aaPredicted RBP12.08□□□□□ -0.47
SMARCA4-214ENST00000589677 FHL1Q13642 323 aa12.08□□□□□ -0.47
SMARCA4-214ENST00000589677 PDCD11Q14690 1871 aaKnown RBP12.08□□□□□ -0.47
SMARCA4-214ENST00000589677 CASP8AP2Q9UKL3 1982 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 KIR2DL5BA0A0G2JN68 375 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 KIR2DL5BA0A0G2JPC4 375 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 EPOPA6NHQ4 379 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 F8W1H4 67 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 EVI2AP22794 236 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 NTF4P34130 210 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 SRSF6Q13247 344 aaKnown RBP12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 KIR2DL5AQ8N109 375 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 IGLV3-12A0A075B6K2 115 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 TMEM238C9JI98 176 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 FOXF2Q12947 444 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 TNFRSF14Q92956 283 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 SNRPD3P62318 126 aaKnown RBP12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 ASCL4Q6XD76 172 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 RNF144BQ7Z419 303 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 CHD5Q8TDI0 1954 aa12.08□□□□□ -0.48
SMARCA4-214ENST00000589677 RBMY1BA6NDE4 496 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 RBMY1EA6NEQ0 496 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 RBMY1DP0C7P1 496 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 RBMY1A1P0DJD3 496 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 RBMY1CP0DJD4 496 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 STPG4Q8N801 248 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 ATG2BQ96BY7 2078 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms