RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ASPMQ8IZT6 3477 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.96□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF785A8K8V0 405 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 K7EN84 100 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 IGLV2-23P01705 113 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 MGST1P10620 155 aaKnown RBP5.96□□□□□ -1.46
ZNF540-206ENST00000589117 CRISP2P16562 243 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 PRSS8Q16651 343 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 FBXL19-AS1Q494R0 122 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 IBA57Q5T440 356 aaKnown RBP5.96□□□□□ -1.46
ZNF540-206ENST00000589117 LURAP1LQ8IV03 231 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 OR1L6Q8NGR2 347 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 RPEQ96AT9 228 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 MISP3Q96FF7 219 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 TIMD4Q96H15 378 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 TNFRSF19Q9NS68 423 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF355PQ9NSJ1 428 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF292O60281 2723 aa5.96□□□□□ -1.46
ZNF540-206ENST00000589117 IGHV2-26A0A0B4J1V2 119 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 PPIAL4CA0A0B4J2A2 164 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 SLC17A3O00476 420 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 PPIAL4GP0DN37 164 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 BTF3P20290 206 aaKnown RBP5.95□□□□□ -1.46
ZNF540-206ENST00000589117 TPPP2P59282 170 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 CX3CL1P78423 397 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 TNXAQ16473 311 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 S100A7AQ86SG5 101 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 OR8B3Q8NGG8 313 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 TMEM190Q8WZ59 177 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 OR8B2Q96RD0 313 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 RAB1BQ9H0U4 201 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 SERTAD4Q9NUC0 356 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 V9GYV3 84 aa5.95□□□□□ -1.46
ZNF540-206ENST00000589117 RIF1Q5UIP0 2472 aaKnown RBP5.95□□□□□ -1.46
ZNF540-206ENST00000589117 ZFHX2Q9C0A1 2572 aaPredicted RBP5.95□□□□□ -1.46
ZNF540-206ENST00000589117 DMXL1Q9Y485 3027 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 GGTLC3B5MD39 225 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 BUB1B-PAK6H3BSN5 160 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 TOX4O94842 621 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 RD3LP0DJH9 198 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 DDTP30046 118 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 CEACAM3P40198 252 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 PTTG1IPP53801 180 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 PLGLAQ15195 96 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 LBHQ53QV2 105 aaPredicted RBP5.94□□□□□ -1.46
ZNF540-206ENST00000589117 LINC00305Q7Z4B0 112 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 PPP1R27Q86WC6 154 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 BAGE3Q86Y29 109 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 BAGE2Q86Y30 109 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 TMEM116Q8NCL8 245 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 CMTM2Q8TAZ6 248 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 SMIM12Q96EX1 92 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF503Q96F45 646 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 MS4A10Q96PG2 267 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 TRGV9Q99603 122 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 SRSF8Q9BRL6 282 aaKnown RBP5.94□□□□□ -1.46
ZNF540-206ENST00000589117 SLC25A2Q9BXI2 301 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 NBEAQ8NFP9 2946 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 BOD1L1Q8NFC6 3051 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 IGHV1-3A0A0C4DH29 117 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 A0A1W2PPI3 338 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 PSMB11A5LHX3 300 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 SNURFLB1AK76 121 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 E7EUB6 86 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 HYPMO75409 117 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 IGLV1-47P01700 117 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 HLA-DQA1P01909 254 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 LIPFP07098 398 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 ORM2P19652 201 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 CA7P43166 264 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 IER3P46695 156 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 UBE2G1P62253 170 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 OR5I1Q13606 314 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 DIAPH2-AS1Q14236 149 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 C9orf152Q5JTZ5 239 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 RASL11AQ6T310 242 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 OR8I2Q8N0Y5 310 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 FAM167A-AS1Q96KT0 104 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 FNDC4Q9H6D8 234 aaPredicted RBP5.94□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF331Q9NQX6 463 aaPredicted RBP5.94□□□□□ -1.46
ZNF540-206ENST00000589117 NAT8BQ9UHF3 227 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 RNF24Q9Y225 148 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 SIGLEC9Q9Y336 463 aa5.94□□□□□ -1.46
ZNF540-206ENST00000589117 MAP1BP46821 2468 aaKnown RBP5.94□□□□□ -1.46
ZNF540-206ENST00000589117 CCL21O00585 134 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 FCN3O75636 299 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 HIST1H1EP10412 219 aaKnown RBP5.93□□□□□ -1.46
ZNF540-206ENST00000589117 CBLN1P23435 193 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 Q0VG73 95 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF672Q499Z4 452 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-206ENST00000589117 PRR30Q53SZ7 412 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-206ENST00000589117 C10orf55Q5SWW7 151 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 C11orf42Q8N5U0 333 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 OR1B1Q8NGR6 318 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 RBM14Q96PK6 669 aaKnown RBP5.93□□□□□ -1.46
ZNF540-206ENST00000589117 CUL9Q8IWT3 2517 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 ZGRF1Q86YA3 2104 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 IGHV3-72A0A0B4J1Y9 119 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 IGLC7A0M8Q6 106 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms