RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 GPHB5Q86YW7 130 aa11.15□□□□□ -0.62
CNN1-208ENST00000588935 OR9G4Q8NGQ1 327 aa11.15□□□□□ -0.62
CNN1-208ENST00000588935 THAP6Q8TBB0 222 aa11.15□□□□□ -0.62
CNN1-208ENST00000588935 LYRM2Q9NU23 88 aaPredicted RBP11.15□□□□□ -0.62
CNN1-208ENST00000588935 TRAV30A0A087WSZ9 112 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 TRAV14DV4A0A0A6YYC5 116 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 SMLR1H3BR10 107 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 SAP30O75446 220 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 GIPP09681 153 aaPredicted RBP11.14□□□□□ -0.63
CNN1-208ENST00000588935 P2RY1P47900 373 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 NHLH2Q02577 135 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 SLC38A11Q08AI6 406 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 OR2F1Q13607 317 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 TMEM116Q8NCL8 245 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 RCC1LQ96I51 464 aaKnown RBP11.14□□□□□ -0.63
CNN1-208ENST00000588935 ELOVL1Q9BW60 279 aa11.14□□□□□ -0.63
CNN1-208ENST00000588935 IGHV3-49A0A0A0MS15 119 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 G3V4G9 280 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 SCGB2A1O75556 95 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 IGKV1-17P01599 117 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 IGLC1P0CG04 106 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 PET100P0DJ07 73 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 SULT1A1P50225 295 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 RAP2BP61225 183 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 DLK1P80370 383 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
CNN1-208ENST00000588935 TOMM20LQ6UXN7 152 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 ZNF600Q6ZNG1 722 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 STX12Q86Y82 276 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 OR1S2Q8NGQ3 325 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 OR2T35Q8NGX2 323 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 SLC25A31Q9H0C2 315 aa11.13□□□□□ -0.63
CNN1-208ENST00000588935 PUS1Q9Y606 427 aaKnown RBP eCLIP11.13□□□□□ -0.63
CNN1-208ENST00000588935 A0A1B0GVG6 124 aa11.12□□□□□ -0.63
CNN1-208ENST00000588935 NDUFA4O00483 81 aa11.12□□□□□ -0.63
CNN1-208ENST00000588935 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
CNN1-208ENST00000588935 ZNF90Q03938 601 aa11.12□□□□□ -0.63
CNN1-208ENST00000588935 LILRB2Q8N423 598 aa11.12□□□□□ -0.63
CNN1-208ENST00000588935 Q8WTZ3 238 aa11.12□□□□□ -0.63
CNN1-208ENST00000588935 ZNF414Q96IQ9 312 aa11.12□□□□□ -0.63
CNN1-208ENST00000588935 MCRIP2Q9BUT9 160 aaKnown RBP11.12□□□□□ -0.63
CNN1-208ENST00000588935 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
CNN1-208ENST00000588935 IGKV1D-37A0A075B6S9 117 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 IGHV3OR16-13A0A075B7E8 117 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 IGHV3-74A0A0B4J1X5 117 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 C2orf70A6NJV1 201 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 LGALS9O00182 355 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 CSN3P07498 182 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 RD3LP0DJH9 198 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 GATA2P23769 480 aaPredicted RBP11.11□□□□□ -0.63
CNN1-208ENST00000588935 RPL12P30050 165 aaKnown RBP11.11□□□□□ -0.63
CNN1-208ENST00000588935 C9orf66Q5T8R8 295 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 IL34Q6ZMJ4 242 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 REC114Q7Z4M0 266 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 TMEM190Q8WZ59 177 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 SMIM3Q9BZL3 60 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 UFC1Q9Y3C8 167 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
CNN1-208ENST00000588935 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 IGKV1OR2-108A0A075B7D4 117 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 FXYD6-FXYD2A0A087WZ82 144 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 PSG1P11464 419 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 FOLR2P14207 255 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 S100A11P31949 105 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 YPEL3P61236 119 aaPredicted RBP11.1□□□□□ -0.63
CNN1-208ENST00000588935 HBG1P69891 147 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 HBG2P69892 147 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 FGL1Q08830 312 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 CLINT1Q14677 625 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 ADAMTSL5Q6ZMM2 481 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 TMEM144Q7Z5S9 345 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 OR5C1Q8NGR4 320 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 NPVFQ9HCQ7 196 aa11.1□□□□□ -0.63
CNN1-208ENST00000588935 IGHV3-66A0A0C4DH42 116 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 UBE2L5PA0A1B0GUS4 154 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 TMEM213A2RRL7 107 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 LYL1P12980 280 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 CBLN1P23435 193 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 TMEM182Q6ZP80 229 aaPredicted RBP11.09□□□□□ -0.63
CNN1-208ENST00000588935 THAP8Q8NA92 274 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 OR51G1Q8NGK1 321 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 DYNLRB2Q8TF09 96 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 TRGV9Q99603 122 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 PBDC1Q9BVG4 233 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 UQCC1Q9NVA1 299 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 HSPB11Q9Y547 144 aa11.09□□□□□ -0.63
CNN1-208ENST00000588935 SORL1Q92673 2214 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 TOMM40O96008 361 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 IL4P05112 153 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
CNN1-208ENST00000588935 AP2S1P53680 142 aaPredicted RBP11.08□□□□□ -0.64
CNN1-208ENST00000588935 LYZP61626 148 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 ATP6V1FQ16864 119 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 CYP2G1PQ6ZSU1 146 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 ZNF546Q86UE3 836 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 ASB13Q8WXK3 278 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 TMEM147Q9BVK8 224 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
CNN1-208ENST00000588935 ZFAND3Q9H8U3 227 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms