RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 UNQ9165/PRO28630Q6UXU0 137 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 GPHB5Q86YW7 130 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 WFDC9Q8NEX5 89 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 OR2T35Q8NGX2 323 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 THAP6Q8TBB0 222 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 ASB13Q8WXK3 278 aa8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 GAR1Q9NY12 217 aaKnown RBP8.18□□□□□ -1.1
SMARCA4-213ENST00000587988 IGHV3OR16-8A0A075B7F1 116 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 TRAV30A0A087WSZ9 112 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 SMCO3A2RU48 225 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 OVOL1O14753 267 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 CD33P20138 364 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 EDN2P20800 178 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 OR10J1P30954 320 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 DLK1P80370 383 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 SLC38A11Q08AI6 406 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 C1QL4Q86Z23 238 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 OR1S2Q8NGQ3 325 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 RCC1LQ96I51 464 aaKnown RBP8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 SLC25A31Q9H0C2 315 aa8.17□□□□□ -1.1
SMARCA4-213ENST00000587988 ZNF320A2RRD8 509 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 NDUFA4O00483 81 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 IGLL1P15814 213 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 RPL12P30050 165 aaKnown RBP8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 ZNF90Q03938 601 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 AKR1C1Q04828 323 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 RELQ04864 619 aaPredicted RBP8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 FGL1Q08830 312 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 FAM106AQ4KMX7 169 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 TM4SF20Q53R12 229 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 IL34Q6ZMJ4 242 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 REC114Q7Z4M0 266 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 TMEM144Q7Z5S9 345 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 STX12Q86Y82 276 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 THAP8Q8NA92 274 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 OR9G4Q8NGQ1 327 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 ST6GAL2Q96JF0 529 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 GGACTQ9BVM4 153 aa8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 PUS1Q9Y606 427 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMARCA4-213ENST00000587988 FXYD6-FXYD2A0A087WZ82 144 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 ZFP92A6NM28 416 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 FNDC10F2Z333 226 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 LGALS9O00182 355 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 ZNF207O43670 478 aaKnown RBP8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 YIF1AO95070 293 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 CSN3P07498 182 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 S100A11P31949 105 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 YPEL3P61236 119 aaPredicted RBP8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 TOMM20LQ6UXN7 152 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 ADAMTSL5Q6ZMM2 481 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 ZNF600Q6ZNG1 722 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 TMEM182Q6ZP80 229 aaPredicted RBP8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 OR5C1Q8NGR4 320 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 TMEM190Q8WZ59 177 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 TRGV9Q99603 122 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 C20orf24Q9BUV8 137 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 NPVFQ9HCQ7 196 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 HSPB11Q9Y547 144 aa8.15□□□□□ -1.1
SMARCA4-213ENST00000587988 TMEM213A2RRL7 107 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 RNF222A6NCQ9 220 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 C2orf70A6NJV1 201 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 SEC14L6B5MCN3 397 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 TOMM40O96008 361 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 PSG1P11464 419 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 GATA2P23769 480 aaPredicted RBP8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 HBG1P69891 147 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 HBG2P69892 147 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 BAXQ07812 192 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 OR2F1Q13607 317 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 CLINT1Q14677 625 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 VWC2Q2TAL6 325 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 OXLD1Q5BKU9 147 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 ZNF546Q86UE3 836 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 LILRB2Q8N423 598 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 OR11H4Q8NGC9 324 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 TMEM147Q9BVK8 224 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 SMIM3Q9BZL3 60 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 WFDC1Q9HC57 220 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 LSM4Q9Y4Z0 139 aaKnown RBP8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 VWFP04275 2813 aa8.14□□□□□ -1.11
SMARCA4-213ENST00000587988 UBE2L5PA0A1B0GUS4 154 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 A8MWP6 167 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 SCGB2A1O75556 95 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 SCAF4O95104 1147 aaKnown RBP8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 RD3LP0DJH9 198 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 CD300CQ08708 224 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 ATP6V1FQ16864 119 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 TEPPQ6URK8 271 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 Q8WTZ3 238 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 AQP10Q96PS8 301 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 MGST2Q99735 147 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 PEMTQ9UBM1 199 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 TNFSF18Q9UNG2 199 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 SELENOKQ9Y6D0 94 aa8.13□□□□□ -1.11
SMARCA4-213ENST00000587988 IGHV3-49A0A0A0MS15 119 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 WI2-2373I1.2A0A1W2PRP0 233 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 G3V4G9 280 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 K7EMT4 169 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms