RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 SPART-AS1P0CW21 52 aa11.64□□□□□ -0.55
NPC1-205ENST00000587163 EIF2B2P49770 351 aaKnown RBP11.64□□□□□ -0.55
NPC1-205ENST00000587163 AP2S1P53680 142 aaPredicted RBP11.64□□□□□ -0.55
NPC1-205ENST00000587163 DEFB1P60022 68 aa11.64□□□□□ -0.55
NPC1-205ENST00000587163 PRSS54Q6PEW0 395 aa11.64□□□□□ -0.55
NPC1-205ENST00000587163 ZNF705AQ6ZN79 300 aaPredicted RBP11.64□□□□□ -0.55
NPC1-205ENST00000587163 LHFPL1Q86WI0 220 aa11.64□□□□□ -0.55
NPC1-205ENST00000587163 Q8WTZ3 238 aa11.64□□□□□ -0.55
NPC1-205ENST00000587163 ENY2Q9NPA8 101 aa11.64□□□□□ -0.55
NPC1-205ENST00000587163 COMMD3Q9UBI1 195 aa11.64□□□□□ -0.55
NPC1-205ENST00000587163 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
NPC1-205ENST00000587163 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
NPC1-205ENST00000587163 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
NPC1-205ENST00000587163 RND2P52198 227 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 FXYD7P58549 80 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 YPEL3P61236 119 aaPredicted RBP11.63□□□□□ -0.55
NPC1-205ENST00000587163 SNRPD3P62318 126 aaKnown RBP11.63□□□□□ -0.55
NPC1-205ENST00000587163 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 UBE2DNLQ8IWF7 75 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 OR1S2Q8NGQ3 325 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 ZNF486Q96H40 463 aaPredicted RBP11.63□□□□□ -0.55
NPC1-205ENST00000587163 NEU1Q99519 415 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 Q9H521 79 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 NRN1Q9NPD7 142 aa11.63□□□□□ -0.55
NPC1-205ENST00000587163 SMIM31A0A1B0GVY4 71 aa11.62□□□□□ -0.55
NPC1-205ENST00000587163 HLA-DRB4P13762 266 aa11.62□□□□□ -0.55
NPC1-205ENST00000587163 OR10J1P30954 320 aa11.62□□□□□ -0.55
NPC1-205ENST00000587163 YIPF6Q96EC8 236 aa11.62□□□□□ -0.55
NPC1-205ENST00000587163 SEPSECSQ9HD40 501 aaKnown RBP11.62□□□□□ -0.55
NPC1-205ENST00000587163 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
NPC1-205ENST00000587163 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 RPS10-NUDT3A0A1W2PQS6 291 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 BUB3O43684 328 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 ATG12O94817 140 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 NXPH3O95157 252 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 APOA1P02647 267 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 IL4P05112 153 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 ELK1P19419 428 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 HTR2BP41595 481 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 SPCS3P61009 180 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 RNASE12Q5GAN4 147 aaKnown RBP11.61□□□□□ -0.55
NPC1-205ENST00000587163 TMEM170AQ8WVE7 144 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 RRNAD1Q96FB5 475 aaKnown RBP11.61□□□□□ -0.55
NPC1-205ENST00000587163 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 KLK11Q9UBX7 282 aa11.61□□□□□ -0.55
NPC1-205ENST00000587163 SMIM9A6NGZ8 99 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 ATP6V1G2O95670 118 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 CD3DP04234 171 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 UCP1P25874 307 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 AARDQ4LEZ3 155 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 C2orf83Q53S99 150 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 FAM222AQ5U5X8 452 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 FAM210BQ96KR6 192 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 HEYLQ9NQ87 328 aaPredicted RBP11.6□□□□□ -0.55
NPC1-205ENST00000587163 HSPG2P98160 4391 aa11.6□□□□□ -0.55
NPC1-205ENST00000587163 NACAE9PAV3 2078 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 TMEM189A5PLL7 270 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 HPGDSO60760 199 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 SLC25A4P12235 298 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 HTN3P15516 51 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 NKX2-1P43699 371 aaPredicted RBP11.59□□□□□ -0.55
NPC1-205ENST00000587163 RNF212Q495C1 297 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 RNASE10Q5GAN6 216 aaKnown RBP11.59□□□□□ -0.55
NPC1-205ENST00000587163 GSG1LQ6UXU4 331 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 OR4D10Q8NGI6 311 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 OR52E5Q8NH55 327 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 RNASE11Q8TAA1 199 aaKnown RBP11.59□□□□□ -0.55
NPC1-205ENST00000587163 LHFPL5Q8TAF8 219 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 NPIPB3Q92617 1050 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 NIPSNAP3BQ9BS92 247 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.59□□□□□ -0.55
NPC1-205ENST00000587163 COPZ2Q9P299 210 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 RFNGQ9Y644 331 aa11.59□□□□□ -0.55
NPC1-205ENST00000587163 RD3LP0DJH9 198 aa11.58□□□□□ -0.56
NPC1-205ENST00000587163 C1orf134Q5TEV5 83 aa11.58□□□□□ -0.56
NPC1-205ENST00000587163 ARRDC1Q8N5I2 433 aa11.58□□□□□ -0.56
NPC1-205ENST00000587163 ZNF709Q8N972 641 aa11.58□□□□□ -0.56
NPC1-205ENST00000587163 OR13C8Q8NGS7 320 aa11.58□□□□□ -0.56
NPC1-205ENST00000587163 RNASEH2CQ8TDP1 164 aaKnown RBP11.58□□□□□ -0.56
NPC1-205ENST00000587163 WDR12Q9GZL7 423 aaKnown RBP11.58□□□□□ -0.56
NPC1-205ENST00000587163 CDS2O95674 445 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 TOMM40O96008 361 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 PSG1P11464 419 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 NCS1P62166 190 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 OR51G1Q8NGK1 321 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 OR52I2Q8NH67 350 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 TERB2Q8NHR7 220 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 ZFAND1Q8TCF1 268 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 GLYATL2Q8WU03 294 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 GPR146Q96CH1 333 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 ACY3Q96HD9 319 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 SLC35B3Q9H1N7 401 aa11.57□□□□□ -0.56
NPC1-205ENST00000587163 SAV1Q9H4B6 383 aaPredicted RBP11.57□□□□□ -0.56
NPC1-205ENST00000587163 OR5AC1P0C628 307 aa11.56□□□□□ -0.56
NPC1-205ENST00000587163 TMEM88Q6PEY1 159 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms