RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GGTLC1Q9BX51 225 aa9.9□□□□□ -0.82
VMP1-202ENST00000585847 PRSS22Q9GZN4 317 aa9.9□□□□□ -0.82
VMP1-202ENST00000585847 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
VMP1-202ENST00000585847 RAB19A4D1S5 217 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 I3L2K1 104 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 ATP6V0E1O15342 81 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 CRYBA1P05813 215 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 PPT1P50897 306 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 KRTAP10-3P60369 221 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 PMS2P11Q13670 270 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 C19orf54Q5BKX5 351 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 UNQ5815/PRO19632Q6UWF5 114 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 TMEM182Q6ZP80 229 aaPredicted RBP9.89□□□□□ -0.83
VMP1-202ENST00000585847 Q6ZRG5 221 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 OR1L4Q8NGR5 311 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 WIPF2Q8TF74 440 aaPredicted RBP9.89□□□□□ -0.83
VMP1-202ENST00000585847 MISP3Q96FF7 219 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 USMG5Q96IX5 58 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 PFDN5Q99471 154 aa9.89□□□□□ -0.83
VMP1-202ENST00000585847 ACTR3CQ9C0K3 210 aaPredicted RBP9.89□□□□□ -0.83
VMP1-202ENST00000585847 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
VMP1-202ENST00000585847 TRBV9A0A0B4J1U6 114 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 CTXND1A0A1B0GTU2 59 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 TCRBV4S1A1TA0A5B7 111 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 SEC14L6B5MCN3 397 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 AGPAT2O15120 278 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 NDUFS6O75380 124 aaKnown RBP9.88□□□□□ -0.83
VMP1-202ENST00000585847 CLN5O75503 358 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 EGR2P11161 476 aaPredicted RBP9.88□□□□□ -0.83
VMP1-202ENST00000585847 MFAP4P55083 255 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 PROK1P58294 105 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 B2MP61769 119 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 PRR20EP86478 221 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 PRR20CP86479 221 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 PRR20DP86480 221 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 PRR20BP86481 221 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 PRR20AP86496 221 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 RUNX1Q01196 453 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 ASPHD1Q5U4P2 390 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 BPIFCQ8NFQ6 507 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 GATAD1Q8WUU5 269 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 MBD3L1Q8WWY6 194 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 MGST2Q99735 147 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 RSG1Q9BU20 258 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 PBDC1Q9BVG4 233 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 MRPL32Q9BYC8 188 aaKnown RBP9.88□□□□□ -0.83
VMP1-202ENST00000585847 SH3BGRL3Q9H299 93 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 SLC39A9Q9NUM3 307 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 SLC45A2Q9UMX9 530 aa9.88□□□□□ -0.83
VMP1-202ENST00000585847 TRBV7-1A0A0A6YYK4 115 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 A0A0G2JLM5 398 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 ZFP92A6NM28 416 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 K7EIM0 57 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 IFNA1P01562 189 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 H2AFB1P0C5Y9 115 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 RHOBP62745 196 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 SLC35B1P78383 322 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 ZNF616Q08AN1 781 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 C9orf152Q5JTZ5 239 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 FFAR4Q5NUL3 377 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 FAM74A1Q5RGS3 127 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 CYP2G1PQ6ZSU1 146 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 STPG3Q8N7X2 389 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 FAM213BQ8TBF2 198 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 SUN5Q8TC36 379 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 ACY3Q96HD9 319 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 NOL4LQ96MY1 436 aaPredicted RBP9.87□□□□□ -0.83
VMP1-202ENST00000585847 FANCD2OSQ96PS1 177 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 FNDC4Q9H6D8 234 aaPredicted RBP9.87□□□□□ -0.83
VMP1-202ENST00000585847 C21orf62Q9NYP8 219 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
VMP1-202ENST00000585847 CLPSL1A2RUU4 121 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 REG1AP05451 166 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 RND2P52198 227 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 MFAP2P55001 183 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 TAS2R45P59539 299 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 PLP1P60201 277 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 YPEL3P61236 119 aaPredicted RBP9.86□□□□□ -0.83
VMP1-202ENST00000585847 ECSCRQ19T08 205 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 AWAT1Q58HT5 328 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 ACSM6Q6P461 480 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 SPSB3Q6PJ21 355 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 STXBP6Q8NFX7 210 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 OR10G4Q8NGN3 311 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 OR10G9Q8NGN4 311 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 OR10G7Q8NGN6 311 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 OR4F5Q8NH21 305 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 NPIPB3Q92617 1050 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 EEF1AKMT3Q96AZ1 226 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 FAM103A1Q9BTL3 118 aaKnown RBP9.86□□□□□ -0.83
VMP1-202ENST00000585847 LINC00527Q9UJ94 153 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 ARL2-SNX15V9GYD0 113 aa9.86□□□□□ -0.83
VMP1-202ENST00000585847 A0A1W2PPV4 95 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 IGLC1P0CG04 106 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 S100A1P23297 94 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 OR10J1P30954 320 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 CFHR3Q02985 330 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 FOXL1Q12952 345 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 OR2T6Q8NHC8 308 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms