RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 C2CD3Q4AC94 2353 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 NIPBLQ6KC79 2804 aaeCLIP7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 IGKV1D-37A0A075B6S9 117 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 IGKV1OR2-108A0A075B7D4 117 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 MFSD2BA6NFX1 497 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 CLN5O75503 358 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 IFNA5P01569 189 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 TRGV3P03979 118 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 TPT1P13693 172 aaKnown RBP7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 KIAA0141Q14154 515 aaPredicted RBP7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 TEX38Q6PEX7 206 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 BAP18Q8IXM2 172 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 OR2G3Q8NGZ4 309 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 LINC01006Q8NI28 216 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 ZNF502Q8TBZ5 544 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 PHYHIPLQ96FC7 376 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 CXorf58Q96LI9 332 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 PSMG3Q9BT73 122 aaPredicted RBP7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 C21orf62Q9NYP8 219 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 TIMM9Q9Y5J7 89 aa7.66□□□□□ -1.18
SMCHD1-212ENST00000585229 IGLC1P0CG04 106 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 SPP1P10451 314 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 FGF7P21781 194 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 ATP6V0CP27449 155 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 NPBWR1P48145 328 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 RAB9AP51151 201 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 RND2P52198 227 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 MFAP4P55083 255 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 SUMO1P63165 101 aaKnown RBP7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 IFITM2Q01629 132 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 AKR1C1Q04828 323 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 C15orf32Q32M92 178 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 TEPPQ6URK8 271 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 C10orf99Q6UWK7 81 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 BTNL8Q6UX41 500 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 ZNF329Q86UD4 541 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 OR4F5Q8NH21 305 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 NPIPB3Q92617 1050 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 GNPNAT1Q96EK6 184 aaPredicted RBP7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 TRGV9Q99603 122 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 MGST2Q99735 147 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 GGTLC1Q9BX51 225 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 NPCDR1Q9BY65 106 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 KLK15Q9H2R5 256 aa7.65□□□□□ -1.18
SMCHD1-212ENST00000585229 TRAV30A0A087WSZ9 112 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 TRBV7-1A0A0A6YYK4 115 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 IGHV3-21A0A0B4J1V1 117 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 A0A0G2JLM5 398 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 A0A1B0GUS0 222 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 TCRBV4S1A1TA0A5B7 111 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 SMCO3A2RU48 225 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 CFDP00746 253 aaPredicted RBP7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 SEC11BP0C7V7 166 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 PF4V1P10720 104 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 PROK1P58294 105 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 TPPP2P59282 170 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 DEFA5Q01523 94 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 ATP5G2Q06055 141 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 FAM209BQ5JX69 171 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 ACSM6Q6P461 480 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 KLHDC1Q8N7A1 406 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 SCGB1C1Q8TD33 95 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 EEF1AKMT3Q96AZ1 226 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF414Q96IQ9 312 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 MS4A10Q96PG2 267 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF355PQ9NSJ1 428 aa7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 GAR1Q9NY12 217 aaKnown RBP7.64□□□□□ -1.19
SMCHD1-212ENST00000585229 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 CLPSL1A2RUU4 121 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 AGPAT2O15120 278 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 IGKV1-17P01599 117 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 IGHV3-48P01763 117 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 OR10J1P30954 320 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 RPL29P47914 159 aaKnown RBP7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 YPEL3P61236 119 aaPredicted RBP7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 SELENOTP62341 195 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 SERF2P84101 59 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 RUNX1Q01196 453 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF343Q6P1L6 599 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 TEX261Q6UWH6 196 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF491Q8N8L2 437 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 HSD17B11Q8NBQ5 300 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 ACY3Q96HD9 319 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 RSG1Q9BU20 258 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 SH3BGRL3Q9H299 93 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 KCNIP2Q9NS61 270 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 SLC45A2Q9UMX9 530 aa7.63□□□□□ -1.19
SMCHD1-212ENST00000585229 C17orf112F2Z3M2 114 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 TGOLN2O43493 480 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 GNG7O60262 68 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 LINC00869P0C866 280 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 CAMLGP49069 296 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 PLP1P60201 277 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 RAB31Q13636 194 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 TCTEX1D4Q5JR98 221 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 EIF5AL1Q6IS14 154 aaKnown RBP7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 SPSB3Q6PJ21 355 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 LCNL1Q6ZST4 164 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 CYP2G1PQ6ZSU1 146 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF680Q8NEM1 530 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms