RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 MFSD2BA6NFX1 497 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 FAM223BA6NKX1 122 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 FAM90A26D6RGX4 464 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 I3L2K1 104 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 M0QZ24 198 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 CCSO14618 274 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 PRAF2O60831 178 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 TMEM50AO95807 157 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 IFNA17P01571 189 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 IGHV3-11P01762 117 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 LGALS1P09382 135 aaKnown RBP4.31□□□□□ -1.72
CDH8-213ENST00000584966 HIST1H1BP16401 226 aaKnown RBP4.31□□□□□ -1.72
CDH8-213ENST00000584966 C15orf32Q32M92 178 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 TMEM65Q6PI78 240 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 FAM223AQ8IWN6 122 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 ZBTB8BQ8NAP8 495 aaPredicted RBP4.31□□□□□ -1.72
CDH8-213ENST00000584966 NECAP1Q8NC96 275 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 KLHL30-AS1Q8NEE0 82 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 OR11H1Q8NG94 326 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 OR1P1Q8NH06 330 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 ZNF502Q8TBZ5 544 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 OR5B12Q96R08 314 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 FNDC4Q9H6D8 234 aaPredicted RBP4.31□□□□□ -1.72
CDH8-213ENST00000584966 PLEKHA3Q9HB20 300 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 ZNF355PQ9NSJ1 428 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 MRPL36Q9P0J6 103 aaKnown RBP4.31□□□□□ -1.72
CDH8-213ENST00000584966 PEMTQ9UBM1 199 aa4.31□□□□□ -1.72
CDH8-213ENST00000584966 DNAH7Q8WXX0 4024 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 PIGBOS1A0A0B4J2F0 54 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 A0A0G2JLM5 398 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 C15orf62A8K5M9 175 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 PMS2P5A8MQ11 134 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 PRSS46E5RG02 174 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 CCL24O00175 119 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 BMPR1BO00238 502 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 SYNGR2O43760 224 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 SIX6O95475 246 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 DHFRP00374 187 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 IGHV3-23P01764 117 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 HSPB1P04792 205 aaKnown RBP4.3□□□□□ -1.72
CDH8-213ENST00000584966 FCGR2BP31994 310 aaPredicted RBP4.3□□□□□ -1.72
CDH8-213ENST00000584966 MYCNOSP40205 109 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 POLR2GP62487 172 aaKnown RBP eCLIP4.3□□□□□ -1.72
CDH8-213ENST00000584966 ERHP84090 104 aaKnown RBP4.3□□□□□ -1.72
CDH8-213ENST00000584966 ATP5G2Q06055 141 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 TATDN3Q17R31 274 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 IAH1Q2TAA2 248 aaPredicted RBP4.3□□□□□ -1.72
CDH8-213ENST00000584966 C2orf83Q53S99 150 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 SLC25A24Q6NUK1 477 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 OR4F17Q8NGA8 305 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 OR1N2Q8NGR9 330 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 OR1S1Q8NH92 325 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 RNASE11Q8TAA1 199 aaKnown RBP4.3□□□□□ -1.72
CDH8-213ENST00000584966 VN1R17PQ8TDU5 208 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 DTD1Q8TEA8 209 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 SCARB1Q8WTV0 552 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 C2orf50Q96LR7 162 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 OR4F4Q96R69 305 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 MAGT1Q9H0U3 335 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 PEF1Q9UBV8 284 aaKnown RBP4.3□□□□□ -1.72
CDH8-213ENST00000584966 RCL1Q9Y2P8 373 aaKnown RBP4.3□□□□□ -1.72
CDH8-213ENST00000584966 ALG5Q9Y673 324 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 S4R3C0 116 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 COL7A1Q02388 2944 aa4.3□□□□□ -1.72
CDH8-213ENST00000584966 FBN3Q75N90 2809 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 IGHV3-21A0A0B4J1V1 117 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 C13orf42A0A1B0GVH6 325 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 CEBPZOSA8MTT3 80 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 PPP5D1E7EU14 171 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 LINC01619G3V211 115 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 MT-CO2P00403 227 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 IFNA21P01568 189 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 IGHV3-48P01763 117 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 CTSGP08311 255 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 IAPPP10997 89 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 DEFA4P12838 97 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 CXCL3P19876 107 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 HTR2BP41595 481 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 NKX2-1P43699 371 aaPredicted RBP4.29□□□□□ -1.72
CDH8-213ENST00000584966 HOXA1P49639 335 aaPredicted RBP4.29□□□□□ -1.72
CDH8-213ENST00000584966 H2BFSP57053 126 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 ZNF616Q08AN1 781 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 FOXI1Q12951 378 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 EXOSC2Q13868 293 aaKnown RBP4.29□□□□□ -1.72
CDH8-213ENST00000584966 KLF5Q13887 457 aaPredicted RBP4.29□□□□□ -1.72
CDH8-213ENST00000584966 RGS21Q2M5E4 152 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 IL34Q6ZMJ4 242 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 UXS1Q8NBZ7 420 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 OR1L6Q8NGR2 347 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 DCUN1D4Q92564 292 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 DLX4Q92988 240 aaPredicted RBP4.29□□□□□ -1.72
CDH8-213ENST00000584966 DAZAP1Q96EP5 407 aaKnown RBP4.29□□□□□ -1.72
CDH8-213ENST00000584966 SMIM8Q96KF7 97 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 OR4C12Q96R67 309 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 ATP6V0BQ99437 205 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 PDCD10Q9BUL8 212 aa4.29□□□□□ -1.72
CDH8-213ENST00000584966 GPN1Q9HCN4 374 aaPredicted RBP4.29□□□□□ -1.72
CDH8-213ENST00000584966 RANGRFQ9HD47 186 aaPredicted RBP4.29□□□□□ -1.72
CDH8-213ENST00000584966 CACFD1Q9UGQ2 172 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 428.4 ms