RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 IFNA21P01568 189 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 ZNF705DP0CH99 300 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-221ENST00000583080 ZNF705BP0CI00 300 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-221ENST00000583080 SPART-AS1P0CW21 52 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 HLA-DRB4P13762 266 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 RND2P52198 227 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 NUTF2P61970 127 aaKnown RBP11.5□□□□□ -0.57
SREBF1-221ENST00000583080 LSM3P62310 102 aaKnown RBP11.5□□□□□ -0.57
SREBF1-221ENST00000583080 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
SREBF1-221ENST00000583080 GDF5OSQ5U4N7 250 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 PRSS54Q6PEW0 395 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 OR1S2Q8NGQ3 325 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 YTHDF1Q9BYJ9 559 aaKnown RBP11.5□□□□□ -0.57
SREBF1-221ENST00000583080 NRN1Q9NPD7 142 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 HLA-DRB4X5D2U9 266 aa11.5□□□□□ -0.57
SREBF1-221ENST00000583080 IGHV3OR16-12A0A075B7B8 117 aa11.49□□□□□ -0.57
SREBF1-221ENST00000583080 TRAV30A0A087WSZ9 112 aa11.49□□□□□ -0.57
SREBF1-221ENST00000583080 DHODHQ02127 395 aa11.49□□□□□ -0.57
SREBF1-221ENST00000583080 TRIM16LQ309B1 348 aa11.49□□□□□ -0.57
SREBF1-221ENST00000583080 SP6Q3SY56 376 aa11.49□□□□□ -0.57
SREBF1-221ENST00000583080 RNASE12Q5GAN4 147 aaKnown RBP11.49□□□□□ -0.57
SREBF1-221ENST00000583080 NEU1Q99519 415 aa11.49□□□□□ -0.57
SREBF1-221ENST00000583080 SCPEP1Q9HB40 452 aa11.49□□□□□ -0.57
SREBF1-221ENST00000583080 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
SREBF1-221ENST00000583080 C3orf85A0A1B0GTC6 90 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 IGKV3-20P01619 116 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 IL4P05112 153 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 HTN3P15516 51 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 OR10J1P30954 320 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 AP2S1P53680 142 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-221ENST00000583080 FAM222AQ5U5X8 452 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 SIGLEC15Q6ZMC9 328 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 LHFPL1Q86WI0 220 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 Q8WTZ3 238 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 DKK2Q9UBU2 259 aa11.48□□□□□ -0.57
SREBF1-221ENST00000583080 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 TMEM189A5PLL7 270 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 BUB3O43684 328 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 YPEL3P61236 119 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-221ENST00000583080 SOHLH1Q5JUK2 328 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 C1orf134Q5TEV5 83 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 GSG1LQ6UXU4 331 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 TMEM170AQ8WVE7 144 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 ZNF486Q96H40 463 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-221ENST00000583080 Q9H521 79 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 BATF3Q9NR55 127 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 COMMD3Q9UBI1 195 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 RFNGQ9Y644 331 aa11.47□□□□□ -0.57
SREBF1-221ENST00000583080 ATG12O94817 140 aa11.46□□□□□ -0.57
SREBF1-221ENST00000583080 NXPH3O95157 252 aa11.46□□□□□ -0.57
SREBF1-221ENST00000583080 UCP1P25874 307 aa11.46□□□□□ -0.57
SREBF1-221ENST00000583080 AARDQ4LEZ3 155 aa11.46□□□□□ -0.57
SREBF1-221ENST00000583080 ZNF709Q8N972 641 aa11.46□□□□□ -0.57
SREBF1-221ENST00000583080 RNASE11Q8TAA1 199 aaKnown RBP11.46□□□□□ -0.57
SREBF1-221ENST00000583080 FAM210BQ96KR6 192 aa11.46□□□□□ -0.57
SREBF1-221ENST00000583080 NIPSNAP3BQ9BS92 247 aa11.46□□□□□ -0.57
SREBF1-221ENST00000583080 SEPSECSQ9HD40 501 aaKnown RBP11.46□□□□□ -0.57
SREBF1-221ENST00000583080 SMIM9A6NGZ8 99 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 APOA1P02647 267 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 SLC25A4P12235 298 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 ELK1P19419 428 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 HTR2BP41595 481 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 NKX2-1P43699 371 aaPredicted RBP11.45□□□□□ -0.58
SREBF1-221ENST00000583080 SPCS3P61009 180 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 RNF212Q495C1 297 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 C2orf83Q53S99 150 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 TMEM88Q6PEY1 159 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 YIPF6Q96EC8 236 aa11.45□□□□□ -0.58
SREBF1-221ENST00000583080 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
SREBF1-221ENST00000583080 WDR12Q9GZL7 423 aaKnown RBP11.45□□□□□ -0.58
SREBF1-221ENST00000583080 HEYLQ9NQ87 328 aaPredicted RBP11.45□□□□□ -0.58
SREBF1-221ENST00000583080 SMIM31A0A1B0GVY4 71 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 TOMM40O96008 361 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 CD3DP04234 171 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 TNP2Q05952 138 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 RNASE10Q5GAN6 216 aaKnown RBP11.44□□□□□ -0.58
SREBF1-221ENST00000583080 OR4D10Q8NGI6 311 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 OR51G1Q8NGK1 321 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 OR13C8Q8NGS7 320 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 LHFPL5Q8TAF8 219 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 NPIPB3Q92617 1050 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 ACY3Q96HD9 319 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 SLC35B3Q9H1N7 401 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 SAV1Q9H4B6 383 aaPredicted RBP11.44□□□□□ -0.58
SREBF1-221ENST00000583080 COPZ2Q9P299 210 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 KLK11Q9UBX7 282 aa11.44□□□□□ -0.58
SREBF1-221ENST00000583080 GSTZ1O43708 216 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-221ENST00000583080 HPGDSO60760 199 aa11.43□□□□□ -0.58
SREBF1-221ENST00000583080 ARRDC1Q8N5I2 433 aa11.43□□□□□ -0.58
SREBF1-221ENST00000583080 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
SREBF1-221ENST00000583080 OR52E5Q8NH55 327 aa11.43□□□□□ -0.58
SREBF1-221ENST00000583080 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
SREBF1-221ENST00000583080 LINC00052Q96N35 136 aa11.43□□□□□ -0.58
SREBF1-221ENST00000583080 CACNG5Q9UF02 275 aa11.43□□□□□ -0.58
SREBF1-221ENST00000583080 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
SREBF1-221ENST00000583080 TEX48A0A1B0GUV7 120 aa11.42□□□□□ -0.58
SREBF1-221ENST00000583080 LOC102723971A0A1B0GUV8 181 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms