RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	TRAV24	A0A0B4J272	114 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772		A0A0G2JRQ6	117 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	FAM24A	A6NFZ4	105 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	FAM90A7P	A6NKC0	464 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	FAM90A23P	A8MXZ1	464 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772		E5RGE8	158 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772		F8W036	122 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	AGPAT2	O15120	278 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	OR7C1	O76099	320 aa	Predicted RBP	3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	TMEM50A	O95807	157 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	PPY	P01298	95 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	TK1	P04183	234 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	PET100	P0DJ07	73 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	RPL35A	P18077	110 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	GLP1R	P43220	463 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	TFPI2	P48307	235 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	FHIT	P49789	147 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	RAB7A	P51149	207 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	PAX9	P55771	341 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	HERV-K104	P61576	105 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	POLR2G	P62487	172 aa	Known RBP eCLIP	3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	BLOC1S1	P78537	153 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	NHLH2	Q02577	135 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	CEACAM21	Q3KPI0	293 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	ODF3L2	Q3SX64	289 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772		Q6P435	159 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	ZNF880	Q6PDB4	577 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	ZNF818P	Q6ZRF7	136 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772		Q6ZRG5	221 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	MRPL21	Q7Z2W9	205 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	TBC1D26	Q86UD7	250 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	LGI3	Q8N145	548 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	SLC35G3	Q8N808	338 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	UBAC2	Q8NBM4	344 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	MRPL30	Q8TCC3	161 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	SECTM1	Q8WVN6	248 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	OR5P3	Q8WZ94	311 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	RPE	Q96AT9	228 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	UPK3B	Q9BT76	320 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	ABHD14A	Q9BUJ0	271 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	SEC11C	Q9BY50	192 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	PLEKHA2	Q9HB19	425 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	PARP11	Q9NR21	331 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	CCL28	Q9NRJ3	127 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	NSG2	Q9Y328	171 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	LINC00312	Q9Y6C7	94 aa		3.36	□□□□□ -1.87
MSI2-216	ENST00000582772	TRBV6-6	A0A0A6YYG2	114 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	TRAV25	A0A0B4J276	109 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	C3orf85	A0A1B0GTC6	90 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772		A0A1B0GW64	132 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	MEX3A	A1L020	520 aa	Known RBP	3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	COLCA2	A8K830	154 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SLC33A1	O00400	549 aa	Predicted RBP	3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	HSPB6	O14558	160 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	HSD17B6	O14756	317 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	ST8SIA3	O43173	380 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	PGLYRP1	O75594	196 aa	Predicted RBP	3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	IGKV1-39	P01597	117 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	IGLV2-11	P01706	119 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	HLA-DRB1	P01911	266 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	IGKV1D-39	P04432	117 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SFTA3	P0C7M3	94 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SEC11B	P0C7V7	166 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SPP1	P10451	314 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	FOLR2	P14207	255 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	PRKACA	P17612	351 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	UCP1	P25874	307 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	PPP1CC	P36873	323 aa	Known RBP	3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SNCA	P37840	140 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	AKR1C3	P42330	323 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	HAAO	P46952	286 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	P2RY1	P47900	373 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	CCL18	P55774	89 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	EIF5A	P63241	154 aa	Known RBP	3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	CCL20	P78556	96 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	FLI1	Q01543	452 aa	Predicted RBP	3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	IL13RA2	Q14627	380 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SMCO1	Q147U7	214 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	IZUMO4	Q1ZYL8	232 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	NMS	Q5H8A3	153 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	FAM76B	Q5HYJ3	339 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	HAGHL	Q6PII5	290 aa	Predicted RBP	3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SPSB3	Q6PJ21	355 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	H1FOO	Q8IZA3	346 aa	Predicted RBP	3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	GAPT	Q8N292	157 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SVBP	Q8N300	66 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	CD177	Q8N6Q3	437 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	CCDC71L	Q8N9Z2	235 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	TEX45	Q8NA69	505 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	SUMF2	Q8NBJ7	301 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	OR5A2	Q8NGI9	324 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	OR2T10	Q8NGZ9	312 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	GPR146	Q96CH1	333 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	TMEM56	Q96MV1	263 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	AIFM2	Q9BRQ8	373 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	CABLES2	Q9BTV7	478 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	TMEM222	Q9H0R3	208 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	OR51I2	Q9H344	312 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	OR1A1	Q9P1Q5	309 aa		3.35	□□□□□ -1.87
MSI2-216	ENST00000582772	CACFD1	Q9UGQ2	172 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms