RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-222	ENST00000582594	LINC00322	Q6ZN03	302 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ITLN1	Q8WWA0	313 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	NPIPB3	Q92617	1050 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	GPR179	Q6PRD1	2367 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	TRAV30	A0A087WSZ9	112 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	KBTBD11-OT1	A0A1B0GTJ5	212 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	PSMB11	A5LHX3	300 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	FNDC10	F2Z333	226 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	SNAI2	O43623	268 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ACP1	P24666	158 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	KIR2DL2	P43627	348 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	CR1L	Q2VPA4	569 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	C10orf55	Q5SWW7	151 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	AMMECR1L	Q6DCA0	310 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	C9orf106	Q8NAJ2	232 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ZPBP	Q9BS86	351 aa		7.75	□□□□□ -1.17
PPP4R1-222	ENST00000582594	SYS1-DBNDD2	H3BUS1	97 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	OR2J3	O76001	311 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	LEPROTL1	O95214	131 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	CSN3	P07498	182 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	CGB3	P0DN86	165 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	CGB7	P0DN87	165 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	HIST1H1E	P10412	219 aa	Known RBP	7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	RASL11A	Q6T310	242 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	FAM231D	Q6ZW35	169 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	CCL13	Q99616	98 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	MRPL32	Q9BYC8	188 aa	Known RBP	7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	MRPL36	Q9P0J6	103 aa	Known RBP	7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	RAI1	Q7Z5J4	1906 aa	Predicted RBP	7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	NCOR1	O75376	2440 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594		A0A087X0K7	114 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	PGP	A6NDG6	321 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ORM2	P19652	201 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	FOXE3	Q13461	319 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	LRRC10	Q5BKY1	277 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	BVES-AS1	Q5T3Y7	98 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	FAM216B	Q8N7L0	139 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	C19orf24	Q9BVV8	132 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	FNDC4	Q9H6D8	234 aa	Predicted RBP	7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	TOX4	O94842	621 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	MOS	P00540	346 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	HBB	P68871	147 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	MBNL2	Q5VZF2	373 aa	Known RBP	7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	SLC25A34	Q6PIV7	304 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	RBMXL3	Q8N7X1	1067 aa	Known RBP	7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	FXYD5	Q96DB9	178 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	CST9L	Q9H4G1	147 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ZNF257	Q9Y2Q1	563 aa		7.74	□□□□□ -1.17
PPP4R1-222	ENST00000582594	IGHV3-21	A0A0B4J1V1	117 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594		A0A1B0GXF2	115 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	DLL1	O00548	723 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	LAMTOR5	O43504	91 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	TMEM164	Q5U3C3	297 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	RUSC1-AS1	Q66K80	236 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	LINC00305	Q7Z4B0	112 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	OR1L8	Q8NGR8	309 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	GTSF1	Q8WW33	167 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ADTRP	Q96IZ2	230 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	HARBI1	Q96MB7	349 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	C7orf69	Q9H7B7	122 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	APELA	P0DMC3	54 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	POU2AF1	Q16633	256 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594		Q71RC1	249 aa	Predicted RBP	7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	MRPL20	Q9BYC9	149 aa	Known RBP	7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ST20	Q9HBF5	79 aa		7.73	□□□□□ -1.17
PPP4R1-222	ENST00000582594	SMG1	Q96Q15	3661 aa	Known RBP	7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594		M0R1B8	84 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	TCTA	P57738	103 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ERH	P84090	104 aa	Known RBP	7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	MZT1	Q08AG7	82 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	TMEM177	Q53S58	311 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	PDPN	Q86YL7	162 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	OR1B1	Q8NGR6	318 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ZNF714	Q96N38	554 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ASCL2	Q99929	193 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	EPDR1	Q9UM22	224 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ABCA1	O95477	2261 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	HSBP1L1	C9JCN9	74 aa		7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	RPP21	Q9H633	154 aa	Known RBP	7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	ZNF430	Q9H8G1	570 aa	Predicted RBP	7.72	□□□□□ -1.17
PPP4R1-222	ENST00000582594	IGKV1D-37	A0A075B6S9	117 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594		P01737	135 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	BPIFB3	P59826	476 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	WT1-AS	Q06250	92 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	OCIAD2	Q56VL3	154 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	TMEM178A	Q8NBL3	297 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	OR1L4	Q8NGR5	311 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	FER1L6-AS2	Q96M78	137 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	CHRDL1	Q9BU40	450 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	TMEM191A	Q9H0A3	160 aa		7.71	□□□□□ -1.17
PPP4R1-222	ENST00000582594	PLCE1	Q9P212	2302 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TCRBV4S1A1T	A0A5B7	111 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CHEK1	O14757	476 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RHOG	P84095	191 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PSG9	Q00887	426 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	DIAPH2-AS1	Q14236	149 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TMUB1	Q9BVT8	246 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	NDUFA4L2	Q9NRX3	87 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms