RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 TEX36Q5VZQ5 186 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 TMEM200BQ69YZ2 307 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 LCN12Q6JVE5 192 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 OR1L4Q8NGR5 311 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 TXN2Q99757 166 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 A0A1W2PN81 502 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 CTRLP40313 264 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 TMEM177Q53S58 311 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 LINC00305Q7Z4B0 112 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 SPACA3Q8IXA5 215 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 OR5AN1Q8NGI8 311 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 CACNA1HO95180 2353 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 DMXL1Q9Y485 3027 aa11.06□□□□□ -0.64
RNF43-205ENST00000581868 TCRBV4S1A1TA0A5B7 111 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 FCN3O75636 299 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 MOSP00540 346 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 APELAP0DMC3 54 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 BPIFB3P59826 476 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 TNXAQ16473 311 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 MAJINQ3KP22 176 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 TMEM30BQ3MIR4 351 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 Q6ZN92 141 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 OR4C13Q8NGP0 309 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 GRAMD2BQ96HH9 432 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 SAP30LQ9HAJ7 183 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 DCHS1Q96JQ0 3298 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 PLXNB1O43157 2135 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 IGKV1D-37A0A075B6S9 117 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 SLC25A17O43808 307 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 FXYD5Q96DB9 178 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 MBD6Q96DN6 1003 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 TPSG1Q9NRR2 321 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 IGHV3-21A0A0B4J1V1 117 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 HYPMO75409 117 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 HSBP1O75506 76 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 SUB1P53999 127 aaKnown RBP eCLIP11.05□□□□□ -0.64
RNF43-205ENST00000581868 UBE2G1P62253 170 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 C3orf36Q3SXR2 165 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 RUSC1-AS1Q66K80 236 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 HCP5Q6MZN7 132 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 WFDC8Q8IUA0 241 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 OR1B1Q8NGR6 318 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 TMEM167AQ8TBQ9 72 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 CCL17Q92583 94 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 RITA1Q96K30 269 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 CLEC7AQ9BXN2 247 aa11.05□□□□□ -0.64
RNF43-205ENST00000581868 IGHV3-72A0A0B4J1Y9 119 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 HIGD1CA8MV81 97 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 ENSAO43768 121 aaKnown RBP11.04□□□□□ -0.64
RNF43-205ENST00000581868 SLC25A5P05141 298 aaKnown RBP11.04□□□□□ -0.64
RNF43-205ENST00000581868 IGLC2P0DOY2 106 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 IGLC3P0DOY3 106 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 TNFRSF1AP19438 455 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 COL5A1-AS1Q5SY13 56 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 ZNF841Q6ZN19 808 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 C19orf35Q6ZS72 473 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 PIP4P1Q86T03 277 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 UQCR10Q9UDW1 63 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 SSUH2Q9Y2M2 353 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 PGPA6NDG6 321 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 H3BTX0 84 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 RNASEKQ6P5S7 137 aaKnown RBP11.04□□□□□ -0.64
RNF43-205ENST00000581868 LYPD2Q6UXB3 125 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 PDPNQ86YL7 162 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
RNF43-205ENST00000581868 M0R2Z0 102 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 SFTPCP11686 197 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
RNF43-205ENST00000581868 MEF2CQ06413 473 aaPredicted RBP11.03□□□□□ -0.64
RNF43-205ENST00000581868 K7EM74 188 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 CEACAM4O75871 244 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 FSTL3O95633 263 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 IGLV2-23P01705 113 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 OR2D3Q8NGH3 330 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 WIPF2Q8TF74 440 aaPredicted RBP11.03□□□□□ -0.64
RNF43-205ENST00000581868 TNFRSF19Q9NS68 423 aa11.03□□□□□ -0.64
RNF43-205ENST00000581868 PPIAL4EA0A075B759 164 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 A0A1W2PPI3 338 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 C17orf100A8MU93 164 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 VWC2LB2RUY7 222 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 PPIAL4DF5H284 164 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 PPIAL4FP0DN26 164 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 HIST1H1EP10412 219 aaKnown RBP11.02□□□□□ -0.65
RNF43-205ENST00000581868 Q56UQ5 140 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 STPG4Q8N801 248 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 MRPL27Q9P0M9 148 aaKnown RBP11.02□□□□□ -0.65
RNF43-205ENST00000581868 EPDR1Q9UM22 224 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 C22orf46C9J442 243 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 CD24P25063 80 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 ADIPOQQ15848 244 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 C11orf42Q8N5U0 333 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 ALKBH7Q9BT30 221 aaPredicted RBP11.02□□□□□ -0.65
RNF43-205ENST00000581868 WASHC3Q9Y3C0 194 aa11.02□□□□□ -0.65
RNF43-205ENST00000581868 PKDREJQ9NTG1 2253 aa11.01□□□□□ -0.65
RNF43-205ENST00000581868 DMXL2Q8TDJ6 3036 aa11.01□□□□□ -0.65
RNF43-205ENST00000581868 PRB3Q04118 309 aaPredicted RBP11.01□□□□□ -0.65
RNF43-205ENST00000581868 GAGE1Q13065 139 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms