RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 OR4D5Q8NGN0 318 aa15.03■□□□□ -0
SS18-218ENST00000581021 ST8SIA2Q92186 375 aa15.03■□□□□ -0
SS18-218ENST00000581021 NPIPB3Q92617 1050 aa15.03■□□□□ -0
SS18-218ENST00000581021 ACY3Q96HD9 319 aa15.03■□□□□ -0
SS18-218ENST00000581021 SEC22CQ9BRL7 303 aa15.03■□□□□ -0
SS18-218ENST00000581021 U3KQK5 164 aa15.03■□□□□ -0
SS18-218ENST00000581021 TRAV14DV4A0A0A6YYC5 116 aa15.02■□□□□ -0
SS18-218ENST00000581021 IGHV3-66A0A0C4DH42 116 aa15.02■□□□□ -0
SS18-218ENST00000581021 RBMY1BA6NDE4 496 aaKnown RBP15.02■□□□□ -0
SS18-218ENST00000581021 RBMY1EA6NEQ0 496 aaKnown RBP15.02■□□□□ -0
SS18-218ENST00000581021 OR11H12B2RN74 326 aa15.02■□□□□ -0
SS18-218ENST00000581021 SYNGR2O43760 224 aa15.02■□□□□ -0
SS18-218ENST00000581021 UPK1BO75841 260 aa15.02■□□□□ -0
SS18-218ENST00000581021 RBMY1DP0C7P1 496 aaKnown RBP15.02■□□□□ -0
SS18-218ENST00000581021 OR10J1P30954 320 aa15.02■□□□□ -0
SS18-218ENST00000581021 ZNF846Q147U1 533 aa15.02■□□□□ -0
SS18-218ENST00000581021 SPAG8Q99932 426 aaPredicted RBP15.02■□□□□ -0
SS18-218ENST00000581021 WDR12Q9GZL7 423 aaKnown RBP15.02■□□□□ -0
SS18-218ENST00000581021 BATF3Q9NR55 127 aa15.02■□□□□ -0
SS18-218ENST00000581021 IFNA4P05014 189 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 ID3Q02535 119 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 HAGHQ16775 308 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 FAM90A2PQ658T7 463 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 NOXA1Q86UR1 476 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 OR1S2Q8NGQ3 325 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 CITED4Q96RK1 184 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 TM2D3Q9BRN9 247 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 VSIRQ9H7M9 311 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 NBEAL2Q6ZNJ1 2754 aa15.01□□□□□ -0.01
SS18-218ENST00000581021 PRSS46E5RG02 174 aa15□□□□□ -0.01
SS18-218ENST00000581021 H3BP45 60 aa15□□□□□ -0.01
SS18-218ENST00000581021 WRBO00258 174 aa15□□□□□ -0.01
SS18-218ENST00000581021 POLR2GP62487 172 aaKnown RBP eCLIP15□□□□□ -0.01
SS18-218ENST00000581021 GAMTQ14353 236 aa15□□□□□ -0.01
SS18-218ENST00000581021 ODF3L2Q3SX64 289 aa15□□□□□ -0.01
SS18-218ENST00000581021 GINS3Q9BRX5 216 aa15□□□□□ -0.01
SS18-218ENST00000581021 TUBA4BQ9H853 241 aa15□□□□□ -0.01
SS18-218ENST00000581021 SRD5A3Q9H8P0 318 aa15□□□□□ -0.01
SS18-218ENST00000581021 IGKV1D-37A0A075B6S9 117 aa14.99□□□□□ -0.01
SS18-218ENST00000581021 TRAV30A0A087WSZ9 112 aa14.99□□□□□ -0.01
SS18-218ENST00000581021 FAM240BA0A1B0GVZ2 78 aa14.99□□□□□ -0.01
SS18-218ENST00000581021 CCSO14618 274 aa14.99□□□□□ -0.01
SS18-218ENST00000581021 MED6O75586 246 aa14.99□□□□□ -0.01
SS18-218ENST00000581021 H2AFB2P0C5Z0 115 aa14.99□□□□□ -0.01
SS18-218ENST00000581021 ATP5IP56385 69 aaPredicted RBP14.99□□□□□ -0.01
SS18-218ENST00000581021 ETFRF1Q6IPR1 90 aa14.99□□□□□ -0.01
SS18-218ENST00000581021 UBQLN2Q9UHD9 624 aa14.99□□□□□ -0.01
SS18-218ENST00000581021 IFNA21P01568 189 aa14.98□□□□□ -0.01
SS18-218ENST00000581021 GPX4P36969 197 aaPredicted RBP14.98□□□□□ -0.01
SS18-218ENST00000581021 YPEL3P61236 119 aaPredicted RBP14.98□□□□□ -0.01
SS18-218ENST00000581021 USF2Q15853 346 aaPredicted RBP14.98□□□□□ -0.01
SS18-218ENST00000581021 IAH1Q2TAA2 248 aaPredicted RBP14.98□□□□□ -0.01
SS18-218ENST00000581021 LAMTOR1Q6IAA8 161 aa14.98□□□□□ -0.01
SS18-218ENST00000581021 ZNF431Q8TF32 576 aaPredicted RBP14.98□□□□□ -0.01
SS18-218ENST00000581021 RCHY1Q96PM5 261 aa14.98□□□□□ -0.01
SS18-218ENST00000581021 IGKV3-7A0A075B6H7 116 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 IGKV1OR2-108A0A075B7D4 117 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 SSSCA1O60232 199 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 DFFBO76075 338 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 CRYBB3P26998 211 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 NKX2-1P43699 371 aaPredicted RBP14.97□□□□□ -0.01
SS18-218ENST00000581021 PAX9P55771 341 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 TCF24Q7RTU0 167 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 ZBTB8BQ8NAP8 495 aaPredicted RBP14.97□□□□□ -0.01
SS18-218ENST00000581021 CIB3Q96Q77 187 aaPredicted RBP14.97□□□□□ -0.01
SS18-218ENST00000581021 RETNQ9HD89 108 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 PAIP2BQ9ULR5 123 aaKnown RBP14.97□□□□□ -0.01
SS18-218ENST00000581021 RCL1Q9Y2P8 373 aaKnown RBP14.97□□□□□ -0.01
SS18-218ENST00000581021 U3KQE9 123 aa14.97□□□□□ -0.01
SS18-218ENST00000581021 TOMM40O96008 361 aa14.96□□□□□ -0.01
SS18-218ENST00000581021 ZNF90Q03938 601 aa14.96□□□□□ -0.01
SS18-218ENST00000581021 SPANXN5Q5MJ07 72 aa14.96□□□□□ -0.01
SS18-218ENST00000581021 MZT2BQ6NZ67 158 aa14.96□□□□□ -0.01
SS18-218ENST00000581021 SCGB2A1O75556 95 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 CCNKO75909 580 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 PSG1P11464 419 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 NPPCP23582 126 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 TFPI2P48307 235 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 RAB11AP62491 216 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 GBGT1Q8N5D6 347 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 SLC35E1Q96K37 410 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 METTL26Q96S19 204 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 DNAH7Q8WXX0 4024 aa14.95□□□□□ -0.02
SS18-218ENST00000581021 OR4C46A6NHA9 309 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 PMS2P5A8MQ11 134 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 SCGB1D2O95969 90 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 IL4P05112 153 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 RD3LP0DJH9 198 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 ZNF124Q15973 351 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 NRARPQ7Z6K4 114 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 FAM24BQ8N5W8 94 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 Q8WTZ3 238 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 WWC2-AS2Q96NR7 200 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 GSKIPQ9P0R6 139 aa14.94□□□□□ -0.02
SS18-218ENST00000581021 MBPP02686 304 aaPredicted RBP14.93□□□□□ -0.02
SS18-218ENST00000581021 P2RY1P47900 373 aa14.93□□□□□ -0.02
SS18-218ENST00000581021 ACOT7LQ6ZUV0 252 aa14.93□□□□□ -0.02
SS18-218ENST00000581021 C12orf45Q8N5I9 185 aaPredicted RBP14.93□□□□□ -0.02
SS18-218ENST00000581021 THAP8Q8NA92 274 aa14.93□□□□□ -0.02
SS18-218ENST00000581021 ENKURQ8TC29 256 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms