RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ESRGQ1W209 222 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 ACSM3Q53FZ2 586 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 ZNF600Q6ZNG1 722 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 SLC7A5P1Q8MH63 180 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 OR1L8Q8NGR8 309 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 OR1P1Q8NH06 330 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 SLC7A6OSQ96CW6 309 aaPredicted RBP5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 TMEM70Q9BUB7 260 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 HINT2Q9BX68 163 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 TMEM231Q9H6L2 316 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 FAM30AQ9NZY2 134 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 STRAPQ9Y3F4 350 aaKnown RBP5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 ORC6Q9Y5N6 252 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 TMEM272A0A1B0GTI8 110 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 A0A1W2PS18 150 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 PLAC8L1A1L4L8 177 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 SMIM30A4D0T7 59 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 FAM90A26D6RGX4 464 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 SULT1C2O00338 296 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 ATP8B1O43520 1251 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 HPRT1P00492 218 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 HBE1P02100 147 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 PLA2G1BP04054 148 aaKnown RBP5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 P0C879 139 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 STAG3L3P0CL85 134 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 FCGR1AP12314 374 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 MYL12AP19105 171 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 CLINT1Q14677 625 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 FCN2Q15485 313 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 RRN3P1Q2M238 152 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 NHLRC2Q8NBF2 726 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 GLMPQ8WWB7 406 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 RAB3CQ96E17 227 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 AIFM2Q9BRQ8 373 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 SLC35B3Q9H1N7 401 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 CCL28Q9NRJ3 127 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 NSG2Q9Y328 171 aa5.24□□□□□ -1.57
SMARCE1-217ENST00000580654 A0A075B6Q4 140 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 LOC100130705A0A1B0GUX0 176 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 C5orf51A6NDU8 294 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 DENRO43583 198 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 SSX5O60225 188 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 TMEM50AO95807 157 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 DEFB130BP0DP73 79 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 DEFB130AP0DP74 79 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 RNASE12Q5GAN4 147 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 SLC24A4Q8NFF2 622 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 DMBX1Q8NFW5 382 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 OR10R2Q8NGX6 335 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 MOB3AQ96BX8 217 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 TMEM80Q96HE8 168 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 FNDC4Q9H6D8 234 aaPredicted RBP5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 PLGRKTQ9HBL7 147 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 MRPL36Q9P0J6 103 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 MRPS16Q9Y3D3 137 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 GOLT1BQ9Y3E0 138 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 OR51B2Q9Y5P1 312 aa5.23□□□□□ -1.57
SMARCE1-217ENST00000580654 A0A087WWL8 130 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 SERTM2A0A1B0GWG4 89 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 LYRM9A8MSI8 78 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 ATP5G1P05496 136 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 UCHL1P09936 223 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 HIST1H1DP16402 221 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 ATP5G3P48201 142 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 COTL1Q14019 142 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 RAB11BQ15907 218 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 HSD17B12Q53GQ0 312 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 C1orf146Q5VVC0 180 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 ZNF114Q8NC26 417 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 RAB24Q969Q5 203 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 PINX1Q96BK5 328 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 FAM3DQ96BQ1 224 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 METTL26Q96S19 204 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 C7orf50Q9BRJ6 194 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 PLEKHA2Q9HB19 425 aa5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 AK6Q9Y3D8 172 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-217ENST00000580654 IRGMA1A4Y4 181 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 EFCAB10A6NFE3 127 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 MARCH11A6NNE9 402 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 ZNF705GA8MUZ8 300 aaPredicted RBP5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 F8WDY8 70 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 CTXN2P0C2S0 81 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 DTYMKP23919 212 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 NKX2-1P43699 371 aaPredicted RBP5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 HOXA1P49639 335 aaPredicted RBP5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 SNRPD3P62318 126 aaKnown RBP5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 MSMO1Q15800 293 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 ZNF79Q15937 498 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 CNIH2Q6PI25 160 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 SECTM1Q8WVN6 248 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 SAV1Q9H4B6 383 aaPredicted RBP5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 RAB22AQ9UL26 194 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 TNXBP22105 4242 aa5.21□□□□□ -1.58
SMARCE1-217ENST00000580654 TRAV6A0A075B6T7 132 aa5.2□□□□□ -1.58
SMARCE1-217ENST00000580654 CBY3A6NI87 242 aa5.2□□□□□ -1.58
SMARCE1-217ENST00000580654 PRB4P10163 310 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-217ENST00000580654 PTHLHP12272 177 aa5.2□□□□□ -1.58
SMARCE1-217ENST00000580654 AZU1P20160 251 aa5.2□□□□□ -1.58
SMARCE1-217ENST00000580654 TALDO1P37837 337 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms