RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	LSM10	Q969L4	123 aa	Known RBP	4	□□□□□ -1.77
KPNB1-209	ENST00000580158	URM1	Q9BTM9	101 aa	Known RBP	4	□□□□□ -1.77
KPNB1-209	ENST00000580158	CABLES2	Q9BTV7	478 aa		4	□□□□□ -1.77
KPNB1-209	ENST00000580158	HINT2	Q9BX68	163 aa		4	□□□□□ -1.77
KPNB1-209	ENST00000580158	SLC35B3	Q9H1N7	401 aa		4	□□□□□ -1.77
KPNB1-209	ENST00000580158	SAV1	Q9H4B6	383 aa	Predicted RBP	4	□□□□□ -1.77
KPNB1-209	ENST00000580158	SPATA2	Q9UM82	520 aa		4	□□□□□ -1.77
KPNB1-209	ENST00000580158	TEX50	A0A1B0GTY4	177 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158		A0A1W2PPK0	400 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	ZNF701	M0R085	212 aa	Predicted RBP	3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	OGG1	O15527	345 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	SCGB2A1	O75556	95 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	IGLV2-8	P01709	118 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	FGF2	P09038	288 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	EVI2A	P22794	236 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	CRYBB3	P26998	211 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	TSPO	P30536	169 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	RPL30	P62888	115 aa	Known RBP	3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	ST3GAL4	Q11206	333 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	UNC119	Q13432	240 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	ACSM3	Q53FZ2	586 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	GDF5OS	Q5U4N7	250 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	MEDAG	Q5VYS4	303 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	SPATA31B1P	Q5VZV4	182 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	EBLN2	Q6P2I7	272 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	FOXI2	Q6ZQN5	318 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	DMBX1	Q8NFW5	382 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	OR1L8	Q8NGR8	309 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	CANT1	Q8WVQ1	401 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	TRUB1	Q8WWH5	349 aa	Known RBP	3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	TMEM230	Q96A57	120 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	IGF2BP2-AS1	Q96M15	143 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	TMEM56	Q96MV1	263 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	CHAC1	Q9BUX1	264 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	NRN1	Q9NPD7	142 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	BLOC1S6	Q9UL45	172 aa		3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	RBMX2	Q9Y388	322 aa	Known RBP	3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.99	□□□□□ -1.77
KPNB1-209	ENST00000580158	TNXB	P22105	4242 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	TRAV5	A0A0B4J249	113 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	TRBV5-5	A0A0J9YX44	114 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	LRCOL1	A6NCL2	159 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	ERICH4	A6NGS2	130 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158		I3L2K1	104 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	SOCS1	O15524	211 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	DENR	O43583	198 aa	Known RBP	3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	MT-CO2	P00403	227 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	IGHV3-48	P01763	117 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	CDK1	P06493	297 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	CD37	P11049	281 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	NQO2	P16083	231 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	ID1	P41134	155 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	RORC	P51449	518 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	TAS2R31	P59538	309 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	CD300C	Q08708	224 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	WDR73	Q6P4I2	378 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	TMED4	Q7Z7H5	227 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	AQP12A	Q8IXF9	295 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	H1FOO	Q8IZA3	346 aa	Predicted RBP	3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	LRTM2	Q8N967	370 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	OR1P1	Q8NH06	330 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	PINX1	Q96BK5	328 aa	Known RBP	3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	DAZAP1	Q96EP5	407 aa	Known RBP	3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	LINC00052	Q96N35	136 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	SLC29A1	Q99808	456 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158	DCSTAMP	Q9H295	470 aa		3.98	□□□□□ -1.77
KPNB1-209	ENST00000580158		A0A096LPF7	62 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158		A0A0B4J293	547 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158		A0A1B0GU03	582 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158		G3V2T6	193 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	TMEM50A	O95807	157 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	HPRT1	P00492	218 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	INS	P01308	110 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	PRM2	P04554	102 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	MAPK3	P27361	379 aa	Predicted RBP	3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	RASSF2	P50749	326 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	HNRNPA3	P51991	378 aa	Known RBP	3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	PAX9	P55771	341 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	FAM78B	Q5VT40	261 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	KDM4D	Q6B0I6	523 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	SPAG16	Q8N0X2	631 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	C10orf126	Q8N4M7	172 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	HSD17B11	Q8NBQ5	300 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	COQ8A	Q8NI60	647 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	CIRBP-AS1	Q8TBR5	109 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	LGALS12	Q96DT0	336 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	SMIM19	Q96E16	107 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	RRNAD1	Q96FB5	475 aa	Known RBP	3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	C16orf74	Q96GX8	76 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	ARHGAP5-AS1	Q96IT6	56 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	PECR	Q9BY49	303 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	NDUFA4L2	Q9NRX3	87 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	TAS2R8	Q9NYW2	309 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	CACNG5	Q9UF02	275 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	CLEC2D	Q9UHP7	191 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158	OR2W1	Q9Y3N9	320 aa		3.97	□□□□□ -1.77
KPNB1-209	ENST00000580158		A0A0A6YYD4	124 aa		3.96	□□□□□ -1.78
KPNB1-209	ENST00000580158	PLAC8L1	A1L4L8	177 aa		3.96	□□□□□ -1.78
KPNB1-209	ENST00000580158	TMEM14DP	A8MWL7	114 aa		3.96	□□□□□ -1.78
KPNB1-209	ENST00000580158	MFNG	O00587	321 aa		3.96	□□□□□ -1.78

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