RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ZNF705DP0CH99 300 aaPredicted RBP6.11□□□□□ -1.43
CASC3-206ENST00000579238 ZNF705BP0CI00 300 aaPredicted RBP6.11□□□□□ -1.43
CASC3-206ENST00000579238 PGAM2P15259 253 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 RPS19P39019 145 aaKnown RBP6.11□□□□□ -1.43
CASC3-206ENST00000579238 PIGPP57054 158 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 YPEL3P61236 119 aaPredicted RBP6.11□□□□□ -1.43
CASC3-206ENST00000579238 NEDD8Q15843 81 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 ZNF705AQ6ZN79 300 aaPredicted RBP6.11□□□□□ -1.43
CASC3-206ENST00000579238 Q6ZRM9 215 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 ZNF575Q86XF7 245 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 Q8WTZ3 238 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 TP53RKQ96S44 253 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 NRN1Q9NPD7 142 aa6.11□□□□□ -1.43
CASC3-206ENST00000579238 C3orf85A0A1B0GTC6 90 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 TEX48A0A1B0GUV7 120 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 SMIM31A0A1B0GVY4 71 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 GSTZ1O43708 216 aaPredicted RBP6.1□□□□□ -1.43
CASC3-206ENST00000579238 SLC25A4P12235 298 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 HLA-DRB4P13762 266 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 PI3P19957 117 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 TGFBR1P36897 503 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 HTR2BP41595 481 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 NKX2-1P43699 371 aaPredicted RBP6.1□□□□□ -1.43
CASC3-206ENST00000579238 EMP1P54849 157 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 SPCS3P61009 180 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 DHODHQ02127 395 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 TRIM16LQ309B1 348 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 RNF212Q495C1 297 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 PRSS54Q6PEW0 395 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 SNX29P2Q8IUI4 249 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 RRNAD1Q96FB5 475 aaKnown RBP6.1□□□□□ -1.43
CASC3-206ENST00000579238 RFNGQ9Y644 331 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 HLA-DRB4X5D2U9 266 aa6.1□□□□□ -1.43
CASC3-206ENST00000579238 A0A0G2JRQ6 117 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 M0QYG6 137 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 BUB3O43684 328 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 APOA1P02647 267 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 UCP1P25874 307 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 OR10J1P30954 320 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 RND2P52198 227 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 USF2Q15853 346 aaPredicted RBP6.09□□□□□ -1.43
CASC3-206ENST00000579238 AARDQ4LEZ3 155 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 C2orf83Q53S99 150 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 C1orf134Q5TEV5 83 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 SIGLEC15Q6ZMC9 328 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 LHFPL1Q86WI0 220 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 OR52E5Q8NH55 327 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 RNASE11Q8TAA1 199 aaKnown RBP6.09□□□□□ -1.43
CASC3-206ENST00000579238 RNASEH2CQ8TDP1 164 aaKnown RBP6.09□□□□□ -1.43
CASC3-206ENST00000579238 NIPSNAP3BQ9BS92 247 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 DKK2Q9UBU2 259 aa6.09□□□□□ -1.43
CASC3-206ENST00000579238 IGHV3OR16-12A0A075B7B8 117 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 B3GALNT1O75752 331 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 TOMM40O96008 361 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 IL4P05112 153 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 OXA1LQ15070 435 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 SP6Q3SY56 376 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 RNASE10Q5GAN6 216 aaKnown RBP6.08□□□□□ -1.44
CASC3-206ENST00000579238 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 ETFRF1Q6IPR1 90 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 FAM219AQ8IW50 185 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 ARRDC1Q8N5I2 433 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 CCDC71LQ8N9Z2 235 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 ZFAND1Q8TCF1 268 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 CLUHP3Q96NS8 147 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 HEYLQ9NQ87 328 aaPredicted RBP6.08□□□□□ -1.44
CASC3-206ENST00000579238 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.08□□□□□ -1.44
CASC3-206ENST00000579238 PLA2G2EQ9NZK7 142 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 COPZ2Q9P299 210 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 COMMD3Q9UBI1 195 aa6.08□□□□□ -1.44
CASC3-206ENST00000579238 NXPH3O95157 252 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 IGKV3-20P01619 116 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 RD3LP0DJH9 198 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 HTN3P15516 51 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 TBPP20226 339 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 NUP62P37198 522 aaPredicted RBP6.07□□□□□ -1.44
CASC3-206ENST00000579238 FAM3BP58499 235 aaPredicted RBP6.07□□□□□ -1.44
CASC3-206ENST00000579238 FXYD7P58549 80 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 LSM3P62310 102 aaKnown RBP6.07□□□□□ -1.44
CASC3-206ENST00000579238 GDF5OSQ5U4N7 250 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 FOXI2Q6ZQN5 318 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 ZNF709Q8N972 641 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 SLC24A4Q8NFF2 622 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 NPIPB3Q92617 1050 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 YIPF6Q96EC8 236 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 SAV1Q9H4B6 383 aaPredicted RBP6.07□□□□□ -1.44
CASC3-206ENST00000579238 KLK11Q9UBX7 282 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 GOLT1BQ9Y3E0 138 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
CASC3-206ENST00000579238 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 CEBPZOSA8MTT3 80 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 C16orf90A8MZG2 172 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 CDK2AP2O75956 126 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 CDS2O95674 445 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 HBE1P02100 147 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 CD3DP04234 171 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 PSG1P11464 419 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 ELK1P19419 428 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 ID1P41134 155 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 PSMB3P49720 205 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms