RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 CFHR4Q92496 578 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GNB1LQ9BYB4 327 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RNASE7Q9H1E1 156 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 IGHV3-21A0A0B4J1V1 117 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SMIM27A0A1W2PRY6 76 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 I3L2K1 104 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NBR2O15453 112 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GATCO43716 136 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NDUFA3O95167 84 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 AMY1AP04745 511 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SLC25A5P05141 298 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 APELAP0DMC3 54 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GZMBP10144 247 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PRTN3P24158 256 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 IER3P46695 156 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PKIAP61925 76 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ARF6P62330 175 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 CX3CL1P78423 397 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 FXYD3Q14802 87 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MMDQ15546 238 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TMEM183BQ1AE95 376 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 IBA57Q5T440 356 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 DTX2Q86UW9 622 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 BAGE2Q86Y30 109 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 KIR3DL3Q8N743 410 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NPBQ8NG41 125 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GRAMD2BQ96HH9 432 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 CHRDL1Q9BU40 450 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SSBP3Q9BWW4 388 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 EPDR1Q9UM22 224 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 HIGD1AQ9Y241 93 aa7.44□□□□□ -1.22
CDK5RAP3-208ENST00000578525 IZUMO1RA6ND01 250 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ZNF705GA8MUZ8 300 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 FCN1O00602 326 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 LY6HO94772 140 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 CNIH1O95406 144 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NBEAP1P0C6P0 100 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 IGLC1P0CG04 106 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RD3LP0DJH9 198 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GP9P14770 177 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GNG5P63218 68 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 KLRD1Q13241 179 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 C9orf152Q5JTZ5 239 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 LDLRAD2Q5SZI1 272 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TMEM136Q6ZRR5 245 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TMEM256Q8N2U0 113 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 CMTM2Q8TAZ6 248 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TMEM190Q8WZ59 177 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MBD6Q96DN6 1003 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SMIM12Q96EX1 92 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 WNT10AQ9GZT5 417 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SERTAD4Q9NUC0 356 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TRAV34A0A0B4J273 112 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TRAV20A0A0B4J274 112 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 A0A1B0GUS0 222 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PGPA6NDG6 321 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 OOSP1A8MZH6 123 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TSTD3H0UI37 97 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ESDP10768 282 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 CRISP2P16562 243 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GPR6P46095 362 aaPredicted RBP7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TCL1AP56279 114 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 LYZP61626 148 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 UBE2G1P62253 170 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RANP62826 216 aaKnown RBP7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PAFAH1B2P68402 229 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 Q0VG73 95 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 C1orf122Q6ZSJ8 110 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 C5orf17Q8NAS9 161 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NHLRC2Q8NBF2 726 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 BLNKQ8WV28 456 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 LINC00479Q96M42 142 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RASL11BQ9BPW5 248 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GSX1Q9H4S2 264 aaPredicted RBP7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 C7orf69Q9H7B7 122 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 KLF12Q9Y4X4 402 aa7.42□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ICE1Q9Y2F5 2266 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GRIFINA4D1Z8 144 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 K7EIM0 57 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NUPR1O60356 82 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TOMM40O96008 361 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 HLA-DQA1P01909 254 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 FRMD6-AS1P0C7T7 363 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PSG1P11464 419 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SFTPCP11686 197 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TPPP2P59282 170 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 USF2Q15853 346 aaPredicted RBP7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 IQCJQ1A5X6 159 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 C5orf64Q2M2E5 130 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 FAM209BQ5JX69 171 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MINOS1Q5TGZ0 78 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 CCDC144NLQ6NUI1 221 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RASL11AQ6T310 242 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NUDT10Q8NFP7 164 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NUDT11Q96G61 164 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 FMC1Q96HJ9 113 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ATG101Q9BSB4 218 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms