RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ERVK-16	P61578	105 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DHODH	Q02127	395 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	REL	Q04864	619 aa	Predicted RBP	3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TMEM187	Q14656	261 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	C2orf83	Q53S99	150 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	LAMTOR1	Q6IAA8	161 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	AMTN	Q6UX39	209 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ZNF705A	Q6ZN79	300 aa	Predicted RBP	3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CROCCP3	Q8IVE0	287 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CMTM1	Q8IZ96	169 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	C1orf158	Q8N1D5	194 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TMEM229B	Q8NBD8	167 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	OR4C16	Q8NGL9	310 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	OR4A16	Q8NH70	328 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TERB2	Q8NHR7	220 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	C11orf45	Q8TAV5	145 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DYNC2LI1	Q8TCX1	351 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	GRAMD2B	Q96HH9	432 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TSC22D3	Q99576	134 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	FKBP11	Q9NYL4	201 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CACNG5	Q9UF02	275 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	FBXL17	Q9UF56	701 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	KLK5	Q9Y337	293 aa	Predicted RBP	3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TMEM56-RWDD3	S4R434	201 aa		3.17	□□□□□ -1.9
PPP4R1-209	ENST00000578329	APOB	P04114	4563 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	IGHV4-4	A0A075B6R2	117 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TRAV8-2	A0A0B4J237	113 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	PLAC8L1	A1L4L8	177 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	IGLL5	B9A064	214 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329		F6UB75	175 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	PRB4	P10163	310 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	PSG1	P11464	419 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	RND2	P52198	227 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	SPCS3	P61009	180 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	YPEL3	P61236	119 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TSPAN5	P62079	268 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ZNF90	Q03938	601 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	RNASE10	Q5GAN6	216 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ACTL10	Q5JWF8	245 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	GPR107	Q5VW38	600 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	STEAP1B	Q6NZ63	245 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	LYZL2	Q7Z4W2	148 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	FAM219A	Q8IW50	185 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ARRDC1	Q8N5I2	433 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	SLC35G3	Q8N808	338 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DUSP18	Q8NEJ0	188 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	OR52E5	Q8NH55	327 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	SMIM4	Q8WVI0	70 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	NPIPB3	Q92617	1050 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	BORCS5	Q969J3	196 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TRIM63	Q969Q1	353 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ZNF486	Q96H40	463 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	KRTAP4-9	Q9BYQ8	210 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	SLIRP	Q9GZT3	109 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329		Q9H521	79 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	NAA60	Q9H7X0	242 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	EXTL2	Q9UBQ6	330 aa		3.16	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ANKRD20A5P	A0PJZ0	165 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PMS2P5	A8MQ11	134 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	GABARAP	H6UMI1	98 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CRX	O43186	299 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TNFAIP8	O95379	198 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RAB3D	O95716	219 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TOMM40	O96008	361 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	AMBP	P02760	352 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PGAM2	P15259	253 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZNF182	P17025	639 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TBP	P20226	339 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	NPPC	P23582	126 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OR10J1	P30954	320 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OPRK1	P41145	380 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	NPBWR1	P48145	328 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RORC	P51449	518 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FXYD7	P58549	80 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ERH	P84090	104 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	KLF9	Q13886	244 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	GAMT	Q14353	236 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZNF79	Q15937	498 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PSMG4	Q5JS54	123 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TMEM268	Q5VZI3	342 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LPCAT3	Q6P1A2	487 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MORN3	Q6PF18	240 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	STXBP6	Q8NFX7	210 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OR51S1	Q8NGJ8	323 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OR51G1	Q8NGK1	321 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	C2CD4C	Q8TF44	421 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RBPMS	Q93062	196 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SLC35B3	Q9H1N7	401 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RBKS	Q9H477	322 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	XCL2	Q9UBD3	114 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HSPB7	Q9UBY9	170 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RABAC1	Q9UI14	185 aa		3.15	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CTDSPL	O15194	276 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MRPS12	O15235	138 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	GSTZ1	O43708	216 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CCNK	O75909	580 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IFNA17	P01571	189 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IL4	P05112	153 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HNRNPC	P07910	306 aa	Known RBP eCLIP	3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms