RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SLURP1P55000 103 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 VWC2Q2TAL6 325 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 LAMTOR1Q6IAA8 161 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 CENPVQ7Z7K6 275 aaPredicted RBP6.23□□□□□ -1.41
COPS3-215ENST00000578317 FAM223AQ8IWN6 122 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 TMEM116Q8NCL8 245 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 VN1R17PQ8TDU5 208 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 SEPSECSQ9HD40 501 aaKnown RBP6.23□□□□□ -1.41
COPS3-215ENST00000578317 A0A0G2JLM5 398 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 DFFBO76075 338 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 MT-CO2P00403 227 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 C4BPBP20851 252 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 EIF2B2P49770 351 aaKnown RBP6.22□□□□□ -1.41
COPS3-215ENST00000578317 AP2S1P53680 142 aaPredicted RBP6.22□□□□□ -1.41
COPS3-215ENST00000578317 PROK1P58294 105 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 DLK1P80370 383 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 KIAA0141Q14154 515 aaPredicted RBP6.22□□□□□ -1.41
COPS3-215ENST00000578317 OR8G2PQ6IF36 304 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 C19orf35Q6ZS72 473 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 ZNF329Q86UD4 541 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 C9orf62Q8N4C0 152 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 TMEM217Q8N7C4 229 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 OR1S2Q8NGQ3 325 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 OR5C1Q8NGR4 320 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 MYOZ3Q8TDC0 251 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 SCARB1Q8WTV0 552 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 CXorf58Q96LI9 332 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 TXN2Q99757 166 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 SLC25A32Q9H2D1 315 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 KLK15Q9H2R5 256 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 FNDC4Q9H6D8 234 aaPredicted RBP6.22□□□□□ -1.41
COPS3-215ENST00000578317 NPVFQ9HCQ7 196 aa6.22□□□□□ -1.41
COPS3-215ENST00000578317 PAIP2BQ9ULR5 123 aaKnown RBP6.22□□□□□ -1.41
COPS3-215ENST00000578317 TRBV7-1A0A0A6YYK4 115 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 OR2J3O76001 311 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 JTBO76095 146 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 NDUFB8O95169 186 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 PRH1P02810 166 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 MDKP21741 143 aaPredicted RBP6.21□□□□□ -1.41
COPS3-215ENST00000578317 OPRK1P41145 380 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 RHOGP84095 191 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 SLC38A11Q08AI6 406 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 FOXL1Q12952 345 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 GAMTQ14353 236 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 ZNF266Q14584 549 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 TMUB2Q71RG4 321 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 TMEM144Q7Z5S9 345 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 KLHDC1Q8N7A1 406 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 OR5AU1Q8NGC0 362 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 OR4X1Q8NH49 305 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 PARD6GQ9BYG4 376 aaPredicted RBP6.21□□□□□ -1.41
COPS3-215ENST00000578317 ZC4H2Q9NQZ6 224 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 ZNF355PQ9NSJ1 428 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 UQCC1Q9NVA1 299 aa6.21□□□□□ -1.41
COPS3-215ENST00000578317 GAR1Q9NY12 217 aaKnown RBP6.21□□□□□ -1.41
COPS3-215ENST00000578317 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.42
COPS3-215ENST00000578317 BOLA2-SMG1P6H3BVE0 249 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 TRGV3P03979 118 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 NPBWR1P48145 328 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 MFAP4P55083 255 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 ATP5G2Q06055 141 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 C15orf32Q32M92 178 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 SLC16A13Q7RTY0 426 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 UBAC2Q8NBM4 344 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 BSCL2Q96G97 398 aaPredicted RBP6.21□□□□□ -1.42
COPS3-215ENST00000578317 UBE2E2Q96LR5 201 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 MS4A10Q96PG2 267 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 ATP5SQ99766 215 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 TMEM147Q9BVK8 224 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 ARL6Q9H0F7 186 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 WFDC1Q9HC57 220 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 CYTL1Q9NRR1 136 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 C21orf62Q9NYP8 219 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 FBXL17Q9UF56 701 aa6.21□□□□□ -1.42
COPS3-215ENST00000578317 LSM4Q9Y4Z0 139 aaKnown RBP6.21□□□□□ -1.42
COPS3-215ENST00000578317 TRAV30A0A087WSZ9 112 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 KANTRA0A1W2PQU2 76 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 BCL2L11O43521 198 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 MPDU1O75352 247 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 CLN5O75503 358 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 CDX1P47902 265 aaPredicted RBP6.2□□□□□ -1.42
COPS3-215ENST00000578317 NKX2-5P52952 324 aaPredicted RBP6.2□□□□□ -1.42
COPS3-215ENST00000578317 TPPP2P59282 170 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 ZNF343Q6P1L6 599 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 PRIMA1Q86XR5 153 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 ZNF491Q8N8L2 437 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 THAP8Q8NA92 274 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 OR4X2Q8NGF9 303 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 ZNF502Q8TBZ5 544 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 TAF15Q92804 592 aaKnown RBP eCLIP6.2□□□□□ -1.42
COPS3-215ENST00000578317 EEF1AKMT3Q96AZ1 226 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 SLC35E1Q96K37 410 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 ARV1Q9H2C2 271 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 WDR83OSQ9Y284 106 aa6.2□□□□□ -1.42
COPS3-215ENST00000578317 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.19□□□□□ -1.42
COPS3-215ENST00000578317 MFSD2BA6NFX1 497 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 IFNA5P01569 189 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 CLEC3BP05452 202 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 EIF5AP63241 154 aaKnown RBP6.19□□□□□ -1.42
COPS3-215ENST00000578317 CLINT1Q14677 625 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms